Raphanus sativus (radish): 108814827
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Entry
108814827 CDS
T06014
Name
(RefSeq) amino acid transporter AVT1D
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108814827
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108814827
Transporters [BR:
rsz02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108814827
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108814827
NCBI-ProteinID:
XP_018442959
UniProt:
A0A6J0K7J3
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Position
7:207454..210432
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AA seq
547 aa
AA seq
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MKLDEEFLHDRDHSFLTDDEENQADLACSDDEHDGDGRKANSDTSSPLSRNRSDNNLSDV
PNPPWPQSYRRSMDLMTGMTPPSVSFMPRSLSRRSGSSFHKKQQSSFFDSFSSSSSKPLL
SQPDPTDKEDTTILPQHFPSQLKLSVTDLPLPQSNLCSVSQSILNGTNVLCGLGLITMPY
AIKESGWLGLLILTFFGVITCYTGILLKRCLESSPGLQTYPDIGQAAFGITGRCIISILL
YIELYAACVEYIIMMSDNLSGLFPNISLSITPGLSLDSAQTFAVLTTILVLPTVWLKDLS
LLSYLSVGGVLASVLLGFCLFWVGAVDGIGFHATGKLMDFSNLPVAVGIFGFGYSGHSVF
PNIYSSMKEPSKFPLVLVICFGFSTVLYISIAVCGYTMFGEALESQFTLNMPKHFLSSKL
AVWTAIVTPMTKYALTITPIVLSLEELIPMAKMRSHGVSILFRTILVISTLVVALSVPFF
AIVAALIGSFLAMLVALIFPCLCYLSILKGKLTNTQIGLCTFIIIFGLVSGCCGTYSAIS
RLADQMT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgacgaagaattcttacacgacagagaccattcctttctaacagatgacgag
gaaaatcaagcagatcttgcttgctccgacgatgaacacgatggagatggtcggaaagca
aattccgatacctcctctccgttgtcacgtaatcgttcagacaacaatctatcagatgtc
ccaaatcctccatggccacagagttaccgacgatcaatggatttaatgacgggaatgact
ccaccttcggtgagtttcatgcctcgaagcctctccaggagatcaggctcttcttttcac
aagaagcaacaatcttcttttttcgattcgttttcttcttcctcaagcaagcctcttctc
tctcaaccagatcctactgacaaggaagatactaccatattacctcaacattttccatct
cagctcaagctctccgtcaccgaccttcccttaccacaatctaatctctgctccgtttct
caatccattctcaacgggaccaatgtgctgtgtggactaggattaataacaatgccttat
gcaataaaagaaagtggatggcttggtttgctcattctcaccttctttggagtcatcact
tgctacacaggcattctcttgaaaagatgtcttgaaagttctcctggacttcaaacttac
cctgacattggtcaagctgcctttggcattacaggtcgctgcatcatttccatccttctg
tatatagagttgtatgcagcttgtgtggaatatataatcatgatgagcgataacttatca
ggactattcccaaacatttcattgagcattaccccagggctatctctagactctgctcaa
acctttgcagttttaaccactattcttgttcttccaacggtctggcttaaagaccttagc
ttactttcttacctttcagttggaggagtcttggcatcagtcttgctcggtttctgcctc
ttttgggtcggtgcagtcgatggaatcgggtttcatgcaacaggaaaacttatggacttc
agtaacttaccggttgctgtagggatcttcggattcgggtactcgggtcattcggttttt
ccaaacatctattcttccatgaaagagccttccaagtttcctcttgttttagttatttgt
tttggtttcagtacggtcttatacatatctatagcagtctgcggttacaccatgtttggt
gaagcgctcgaatcacaattcacgttgaacatgcctaaacactttctttcatctaaacta
gcggtctggactgcgattgttacaccgatgacaaaatacgctttgacaatcaccccaatc
gttctgagtctcgaagaacttattccaatggctaagatgaggtcacatggtgtgtccata
ttgttcagaacaatcctagtcatctctactctggtcgttgctctttcagttcctttcttt
gcgattgtggctgcactaatcggatcgttccttgcaatgcttgtggctctcatctttcca
tgtctatgttaccttagtatcctcaagggtaaattaaccaacacacaaatcggattatgc
acattcattataatctttgggttggtgagtggttgttgtggtacttactccgccatctca
agattagcagaccagatgacatga
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