Raphanus sativus (radish): 108814901
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Entry
108814901 CDS
T06014
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108814901
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108814901
BRITE hierarchy
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
C2HC_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108814901
NCBI-ProteinID:
XP_018443047
UniProt:
A0A6J0K504
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Position
7:540023..543514
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AA seq
513 aa
AA seq
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MQMIPGDPFSISSSMGGFVHQEQHLHHIQQHIPDINPNSSSNPNAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKFKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNPATTTMPANLNFGNDSH
VMNNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHPQGLSDMVQMNSAGNHHLFP
LSSSSVLPDFSGHHHSQQFQIPTTSTNPNLTLSSSSTSQQNSASLPSLQHQTLKDSSFSP
LFSSSSSESKQNKPLSPMSATALLQKAAQMGSTRSNSTTAPSIFAGPTMTSISSAASPPP
RSSSPMMIQQQLNNNFNTNAPREIHNLAPPISGVTTSSVDNNHRFQSNRSGMNPAQQMGL
TRDFLGVSNEHHAHQTGHRPFLPQELARFAPSS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttccatgggagggtttgtccac
caagaacagcatcttcatcatattcagcagcatatcccggacattaaccctaattctagc
tctaaccctaatgcgaaaccaaactcttcatcagccaagaagaagagaaatcaacctggc
accccagatccagatgcggatgtcatcgctctatcgccaaccaccctcatggcaacaaac
agattcgtctgcgagatctgcaacaaagggtttcaaagggaccagaacctacaactccat
cgccgtggccacaaccttccatggaagttgaagcaacggtccagcaaggaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcttctagggccctt
ggagacctcaccgggataaagaaacactatagccgcaagcacggagaaaagaagtttaaa
tgcgaaaagtgttctaagaaatatgctgttcaatctgattggaaggcgcacgcaaaaact
tgtggcactcgtgagtataagtgcgactgtggcacattgttctccaggaaagatagtttc
atcacacatagagctttctgcgacgcattgacagaagaaggtgcgaggatgagttcactt
agtaataatccagccacaacaacgatgccggcgaatcttaattttggaaatgattcacat
gttatgaataatccaaatcttccacatggatttgtccacagaggagttcatcatcccgac
attaatgctgctatctctcaatttggattagggttcggacatgacctaagtgcaatgcat
ccgcaaggtttatccgacatggtacaaatgaattccgctgggaaccaccacctctttccg
ttgtcttcatcatcagtcctccctgacttctccggccaccaccacagccaacaattccaa
attcccacaacttcgacaaaccctaatctcaccttatcatcatcctcaacatcacaacaa
aactcagcttcactaccatcactacaacaccaaaccctgaaagactcttctttctccccg
ctcttctcctcctcctcctccgaaagcaaacaaaacaagcctctctctccaatgtctgcc
actgcactcttacaaaaagctgcacaaatgggatccactagaagcaactccaccacggct
ccgtccatcttcgccggcccaacaatgacgtcaatttcatccgcagcttctcctcctcct
cgatcatcttctccaatgatgatccaacaacagctcaacaacaacttcaacaccaatgcc
ccaagagagatccataatcttgctcctcctatcagtggtgtaaccacgagtagtgtggat
aataaccatcgatttcaatcaaaccggtcaggtatgaacccggctcagcagatgggtcta
acccgggatttcctcggagtgagcaacgagcatcacgctcaccaaactggccatcgtccg
tttttgcctcaggaactcgcaaggtttgctccatcgagttga
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