Raphanus sativus (radish): 108815105
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Entry
108815105 CDS
T06014
Name
(RefSeq) protein argonaute 9
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108815105
03036 Chromosome and associated proteins [BR:
rsz03036
]
108815105
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108815105
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108815105
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108815105
microRNA pathway
RISC loading complex
108815105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108815105
NCBI-ProteinID:
XP_018443266
UniProt:
A0A6J0K702
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Position
7:complement(6659742..6664522)
Genome browser
AA seq
871 aa
AA seq
DB search
MDPNKSTHLQMARSGNGSRGQKIDLLTNHFGVNFTTPKSQHFFQYSVAITYEDGNPVEAK
GIGRKILAKVQETYQTDLGFKHFAYDGDKTLFTVGPLPNTKLDFFVVLEDMSCTRSNAST
SDAHTKRLRRPNQSKRFNVTISFAAKISMQAIQGALQGKETDDLQDAVRVLDVILRQNAA
TKGCLLVRQSFFHNDAKYFSNGLGGFNLCRGFHSSFRATQRGLSLNIDVSSTLIVTPGPV
MRFLTDNQGVRDQSFIDWKKAERTLKNLRVKVSHSNREYKITGLTRLPCRDQTFIWKQKQ
GNGEVKEIEVTVYDYFTKHLKIALRYSGDLRCISVGKPKRPNYIPIELCDLVSLQRYTKA
LTTFQRSKIVKESVQKPQEKMKMLNNAIKDSGYNSDPMLQECGVRIGSDFTQVEGRVLPT
PNLKASNGVDLFPTNGRWNFNNKKFAEAATVAKWAVVNFSAKCNPRRIVDDLIRCGRMKG
MNIEVPMHDVFEENDQFKSAPGSVRVEKMFAYMESKIKEPPKFLLCILSEKNSDVYGPWK
KKTLFGYNGIVNQCIAPPKTVNDQYLTNVLLKINAKLGGLNSMLAIERTRGKSSVMAVPT
IIIGMDVSHGSPGQSDVPSIAAVVSSREWPLMSKYRAFVRTQPRKVEMIDNLFNPVSDKD
DDGIMRELLLDFESSCKVKPKNIIIFRDGVSESQFKQVLNIELDQMKKACKFLDEQWDPK
FTVIIAQKRHQTRFFQGRSRDKNVPPGTIVDSRICSPSNNDFYLCAHAGILGTTRPTHYH
VLYDEIGFSTNDLQELVHSLSYVYQRSTTAISIVAPVMYAHLAAAQLATAMKFEDNSESS
SSRGGITSGGAVPVPLMPKLKKNVATSMFFC
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaacaagagtactcatcttcaaatggctcggagtggcaacggttctagagga
caaaagatcgatctgcttacaaaccactttggtgtcaacttcaccacaccaaagagtcaa
catttcttccaatacagtgttgctatcacatatgaagatgggaatccagttgaagccaag
ggtattggcagaaagattcttgcaaaagttcaagaaacttatcaaaccgatttgggtttc
aaacactttgcttatgatggcgacaagactcttttcaccgttggtcctcttcccaacacc
aaactagacttctttgtcgttcttgaagacatgtcttgtaccagaagcaacgccagtacc
agtgacgcccacacgaaaagattaagacgccctaatcagtccaaaaggttcaacgttaca
atcagctttgctgcaaaaatctcaatgcaagctatccaaggtgctcttcaaggaaaggaa
acagatgatcttcaagatgctgtaagagtgttggatgttatcttgcgccagaatgcagct
acaaaaggttgtcttcttgttcggcaatctttcttccacaatgacgcaaagtacttttca
aatggccttggaggttttaatctatgcagaggattccattcaagcttcagagctactcag
agaggcttatccctcaacattgatgtttcttctacgttgatagtaacacctggtcctgtt
atgaggttccttactgacaatcaaggagtgagagatcaatcctttatcgactggaaaaag
gctgaacgtactctcaagaatcttagagttaaagtctcccactcaaaccgagaatacaag
ataaccggactaactaggcttccctgtagagaccaaacgtttatttggaagcaaaagcaa
ggaaacggggaagttaaggagattgaggttacagtgtatgattacttcactaaacatctt
aaaattgcactgcgttattcaggtgacttgcgttgcatcagtgtcggtaaaccaaaacgt
cctaattacattcccattgagctatgtgatcttgtttctcttcaacgctatacgaaagct
cttacaactttccagaggagtaaaatagtcaaagaatcagtacagaaaccacaagaaaag
atgaaaatgttaaacaacgctattaaggacagtggttataatagtgaccctatgttacaa
gaatgtggtgtcagaattggctctgacttcactcaagtggaaggccgcgtcttacctaca
cctaatctgaaagcgagcaatggagtggatctattccctacaaatgggcgttggaatttc
aataataagaaatttgctgaggccgccacagtcgctaaatgggctgttgtgaacttttct
gccaagtgtaatccacggaggattgttgatgatttaatcagatgtggaaggatgaaagga
atgaacatagaagttccaatgcatgacgtctttgaagaaaatgatcagtttaagtctgca
cctggttctgtaagagtggagaaaatgtttgcatatatggaatcaaaaatcaaagaacct
ccaaagttccttctctgtattctctcagaaaaaaactctgatgtttatggtccttggaaa
aagaaaactctttttggatataatggaatcgtgaatcagtgtattgcccctccaaaaacc
gtgaatgatcaatatctaactaatgtactcctcaaaataaatgccaagcttggtggcttg
aattcaatgttagctattgagcggacacgaggaaaatcttctgtaatggcagtccctacc
atcattattgggatggatgtgtctcatggttcccctggacagtctgatgtaccatccata
gccgcggttgtgagctcgagagaatggccactgatgtcaaaatacagggcttttgtgcgt
acacagccacgtaaagtcgaaatgattgataatctcttcaaccccgtctctgataaagat
gacgacggtattatgagggagctcttgcttgactttgagtcaagttgtaaagtgaaaccc
aagaacattatcattttcagggatggtgtgagtgaatctcagtttaagcaagttcttaat
attgaactggatcagatgaagaaagcgtgcaagttccttgatgagcagtgggatcccaag
tttacagtgatcattgctcagaaaaggcaccaaaccaggttctttcagggcagaagccgt
gataaaaatgttcctccaggaacaatagttgacagcaggatctgcagccccagcaacaat
gatttttatctttgtgctcatgctggaatacttggaactacaaggccaacacattaccat
gtgctctatgatgagattgggttttcgacgaatgacctccaagaacttgttcattctcta
tcctatgtctaccagcggagcacaactgccatctctatagttgcacctgtaatgtatgct
catttggcagcagcacagttggcaactgcgatgaagtttgaggacaactccgagtcttca
tcgagccgtggtgggatcacatctggtggagcagtacctgtccctctcatgccgaagctg
aagaagaatgttgctacctcaatgttcttctgttga
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