Raphanus sativus (radish): 108815361
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Entry
108815361 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108815361
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108815361
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-met
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108815361
NCBI-ProteinID:
XP_056865850
UniProt:
A0A9W3DPV0
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Position
4:14959644..14968771
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AA seq
511 aa
AA seq
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MSSSSYNTSVVPSSPSTQPFFITGSGAGDNAFDRKDTFMSMIQQPNSSAPQPKKRRNQPG
NPNPDAEVVALSPTTLMATNRFICDVCKKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKR
KVYICPEPTCVHHDPSRALGDLTGVKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTIFSRRDSYITHRAFCDALIQETARNPTMTLTSITAASSGAGFGGFHGRL
EGGNALSHHHLSDHTNSGFSSFSGYNLNFPSSGNSRDFAPQTSNPNFLIQYSSSQGIVTV
PNNNNNNNDQSFMNQQGLIHFDPVNNINLKSSTTNNSLFNIGFFQENTKNSETTLPSLYS
TDALVHHGEGSLNVNSNVSATALLQKATQLGSITSNDPSALFRGLGSSSNSSSVVVNDFG
GGHIMGNDNNGNLQGLMNSVVAVNGGGTGGSGGNIFDVDFGNNNGNMSGSDNLTLDFLGV
GGMVRNVNRGGAGRGRVRGDVSLIGELKFPE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcatcatataatacaagcgttgttccttcatcaccctcaactcagccgttc
ttcatcaccggctccggcgccggagataacgcctttgaccgaaaagatacttttatgtca
atgattcaacaacctaactcctcggctccacaacccaagaaacgaagaaaccaaccgggg
aacccaaatcctgatgcggaagtggtagcgttgtctccaacgacactgatggctacaaat
agattcatatgcgatgtatgcaagaaagggtttcaaagagaacaaaatctacagcttcac
cgaagaggacacaatcttccatggaagctcaaacagaagtcaaccaaagaagtgaagagg
aaagtgtatatttgtccggaaccaacgtgcgtccaccatgacccctcacgtgctctcgga
gacctcaccggagtcaagaagcattactatcgtaaacacggagaaaagaagtggaaatgc
gacaaatgttcaaagcgttatgcggttcaatcggattggaaagctcactctaagacttgt
ggtactaaagagtatcgatgtgactgtggtaccatcttctctagacgcgatagttacatt
acacacagggctttctgtgatgcactaatacaagagaccgctagaaaccctaccatgacc
ttgacgtcaataacagctgctagcagcggcgccggcttcggtggatttcacgggagactc
gagggtggcaacgctctctcccaccaccatttgagtgaccatactaactccggattttcg
tctttctcaggttacaatctaaactttccatcttctggaaatagcagagactttgctccg
caaacgtcaaaccctaacttcttgatccaatactcatcgagccaaggaatagtgactgta
ccaaacaacaacaacaacaacaacgatcagagtttcatgaaccaacaaggtctcatccac
tttgatccagtcaataacataaacctcaagagtagcaccaccaacaacagcttgttcaac
attggattctttcaagaaaacaccaaaaactcagagacgactcttccttctctatacagc
accgacgctcttgttcatcacggtgaaggaagcttgaacgtgaattctaacgtgtcagcc
acggcactgcttcagaaagctactcaattgggttcaatcacaagcaacgatccttctgct
ttgttcagaggcttaggttcttcgtctaactcgtcaagcgtggttgttaatgactttgga
ggagggcatattatggggaacgataataacggtaaccttcaaggtctaatgaactcagta
gtggccgtaaatggcggtggtaccggcggatccggtggcaatatcttcgacgttgacttt
ggaaacaataatggaaatatgagcggctcggacaacttaactttggattttcttggcgtt
ggaggaatggtgagaaatgttaatcgcggcggtgctggtcgtggccgtgttcgtggagac
gtttctttgattggtgaactgaagtttcctgaataa
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