Raphanus sativus (radish): 108815364
Help
Entry
108815364 CDS
T06014
Name
(RefSeq) protein NRT1/ PTR FAMILY 2.13-like isoform X1
KO
K26552
MFS transporter, POT/PTR family, nitrate/chloride/glucosinolate transporter
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108815364
Transporters [BR:
rsz02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
108815364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTR2
Motif
Other DBs
NCBI-GeneID:
108815364
NCBI-ProteinID:
XP_056846925
UniProt:
A0A9W3C5L9
LinkDB
All DBs
Position
7:11122007..11135872
Genome browser
AA seq
609 aa
AA seq
DB search
MVLMDRRDGSSAPQPKMDVVDSHNRKSSSDSFSDAEKVEKKRGGWRAVTFILGNETLERL
GTIGLLSNFMVYLTRVFHLEQVNAANVINIWFGFTNLTPLVGAFISDAYVGRFKTIAFAS
FATLLGLLTVTLTASVPQLHPATCNSKDPVSCSGPNKLQFGTLLLGLGFLSIGAGGIRPC
SIPFGVDQFDQRTEEGVKGVASFFNWYYLTFTVVLLITQTVVVYIQDQVSWIIGFSIPTG
LMACAVVMFFAGMRLYIYVKPEGSIFSSIAQVIMAARLKRKMKLSVEDDGTVTYYDPPVK
DSVVHKLHRSNQFRFLDKAAVIIEGDLTSEGVPANKWRLCSIQEVEEVKCLIRVVPVWSA
GIISLTAMSQQGTFTVSQALKMDRHMGPKFEVPPGSLSVISLLTIGIFLPIYDRVLVPFL
RRITGHKSGITLLQRIGTGIVFAILSMIVAGLVEGVRRTRSIKAGDPNGMTPMSVFWLSP
QLILMGLCEAFNIIGQIEFFNSQFPEHMRSIANALFSLSFAGSSYLSSVLVTVVHKFSGG
HERPDWLNKNLNEGKLDYFYYLIAVLGVVNLVYFWFCARGYRYKVGSQMGDLKEDKSIAN
VEMSSKTNK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggttttgatggatagaagggacggttcttcagcaccgcagccgaagatggatgttgtt
gattcacacaatcgaaaaagctcgtcggattctttttcggatgctgagaaggttgagaaa
aagcgtggaggctggagagccgttacgttcattttaggaaatgaaacgcttgagagactg
ggaacgattgggttgttatcaaacttcatggtgtatctaaccagagtgttccatttggaa
caagtcaacgctgcaaatgtcatcaacatttggtttggttttaccaatctcacacctctc
gtcggcgcttttatctcggacgcttacgtcggacgtttcaagaccattgctttcgcgtca
ttcgccaccctcctcggactactgacggtgacactcacagcatcggttcctcaactccat
ccagcaacatgcaatagcaaagatccagtcagttgcagcggtccgaacaagctccagttc
gggactctgctcttaggtctcggtttcctttccataggggcaggaggaataagaccatgt
agcatcccttttggagttgaccagtttgaccaacgaactgaggaaggtgttaaaggagtg
gctagtttcttcaactggtattacctgactttcactgtggttctgcttattacacagacc
gtcgttgtgtatattcaggaccaagtcagctggatcatcggttttagtatccctactgga
ctcatggcttgtgcggtagttatgtttttcgctggaatgaggctttacatctatgttaaa
cctgaaggaagtatattctccagtatcgctcaagttatcatggcagctcgtttgaaacga
aagatgaagctctcggtggaagatgacggcacagtgacctactatgaccctcccgttaaa
gatagcgttgtacacaagctacaccgaagtaaccaattcaggtttctagataaagcggcg
gtgataatagaaggtgatctaacatctgagggagttccagcaaacaagtggcggctatgc
agcattcaagaagtagaggaagtaaagtgtttgatccgagtagttcctgtttggtcggcc
ggaataatatccctcacagcaatgtcacaacaaggaactttcacggtctctcaagctttg
aaaatggaccgacatatgggtcctaaattcgaggttccgcccggttctctctccgtcatc
tctctcctcaccatcggcatctttcttcccatatacgacagagttctagtcccgttcctc
cgccgcatcaccggccataaatccggtatcacactcctccaacgtatcgggacagggatc
gttttcgcaatcctttccatgattgttgccggcctcgtggagggcgtgagacgcacacgc
tccatcaaggcaggtgacccgaacggtatgactcccatgtccgtgttttggctctcgccg
cagctaattctgatgggactatgtgaagcattcaatataataggacagatagagttcttc
aacagtcagtttccggaacacatgagaagcatagctaatgctctcttctctctgtccttt
gctggttcgagctatcttagcagtgttctagtcacggttgttcataagttttccggtggt
catgaacgtcctgattggctaaacaagaatctcaacgaggggaaattggattacttctat
tatctgatcgcggttttgggtgtggttaatctggtttacttttggttttgtgctcgggga
taccggtacaaggttggttcacagatgggagatttgaaggaggataagagtattgctaat
gttgagatgagttccaaaaccaacaagtag
DBGET
integrated database retrieval system
