Raphanus sativus (radish): 108815827 Help Entry 108815827         CDS       T06014                                  Name (RefSeq) protein TORMOZ EMBRYO DEFECTIVE   KO K14555   U3 small nucleolar RNA-associated protein 13 Organism rsz  Raphanus sativus (radish) Pathway rsz03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:rsz00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     108815827  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:rsz03009]     108815827 Ribosome biogenesis [BR:rsz03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     108815827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 EIF3I Utp13 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_NWD2_C WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_Vps41 Ge1_WD40 PROPPIN WD40_like Beta-prop_HPS5 KNTC1_N Nbas_N Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_NOL10_N Beta-prop_RSE1_2nd Beta-prop_RIG_1st Tricorn_2nd Motif Other DBs NCBI-GeneID:  108815827 NCBI-ProteinID:  XP_018443839 UniProt:  A0A6J0KA46 LinkDB All DBs Position 7:2255821..2260484 Genome browser AA seq 872 aa AA seqDB search MAPQSLKKNYKCSRSLKQFYGGGPFVVSSDGSFIACACGDAINIVDALDSSVKSTIEGES DALTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRTWKGHEGPVMGMAVHASGGLLATA GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDVNKSILISGSDDATVRVWDLMAKNT EKKCLGILDKHFSAVTSIALSEDGWTLLSAGRDKVVNVWDLHDYSCKTTVATYEVLEAVV PVSSGKPFASFVASLDKKTKKKNTPSQETHFITLGERGVVRIWKSEGSVCLYEQKSSDIT VSSDDEESKRGFTAAAMLPSDRGLLCVTADQQFFVYTVEENVEESALVLSKRLVGYNEEI SDMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVT GSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE DSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK RRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSC GADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINLWHDSTASDKE DEFRKEEETILRGQELENAVLDAEYTKAIRLAFELRRPHKVYELFAGLCKKRESDDQIVK ALQGLEKEEFRLLFEYLREWNTKPNRCHIAQFVLYQTFNILPPTEIVQVKGIGELLEGLI PYSQRHFNRMDRFVRSSFLLDYTLGEMSVIDPETETEYRKDKKIEEEVIPSVSAMEQDDQ KTPSRKRKSQKSKDKSNKKRLVEKAQGNVIAV NT seq 2619 nt NT seq  +upstreamnt  +downstreamnt atggctcctcagtcgttgaagaagaactacaagtgctctcgatctctaaagcagttctac ggcggcggccccttcgtcgtttcgtctgatggttcttttatcgcctgtgcttgtggcgac gccattaacatcgtcgatgcgttggactcgtcggttaaatcaacgatcgaaggagagtcg gatgcgctcactgctttggctcttagtcctgacgataagctgctcttctccgctgggcat agtaggcagattcgagtttgggatttggaaaccttgaaatgcattcgcacttggaaggga cacgaggggcctgtgatgggaatggctgtccacgcatctggtggattgttagctacagct ggagctgataggaaggtgcttgtttgggatgttgatggtggtttctgcactcattatttc aaaggtcataaaggagttgtttcgagtatcttgttccatcctgatgttaacaaaagcatt cttatatcgggaagtgatgatgcaaccgttcgtgtatgggatcttatggcaaagaatact gagaagaaatgtcttggaattttggataagcatttttcagccgtgacttccattgctctg tcagaggatggatggactttgctcagtgctggaagagataaagttgtgaatgtgtgggac cttcatgattatagctgcaagactacggttgcaacatatgaggtactagaagctgtggta ccagtttcttctgggaaacctttcgcttcatttgtagcttctcttgataagaagactaag aagaaaaacactccttctcaagaaacgcattttattactctcggggaacgtggtgttgtg cgcatttggaagtctgaaggttcagtttgcctctacgagcagaagtcgtcggatatcact gtcagctcggatgatgaggaatctaaaagagggttcactgcagctgctatgctaccttct gatcgtggactgctttgcgtgactgctgatcagcagttctttgtctacacggttgaggaa aatgtagaagaatcagcgttagtgctaagcaagaggcttgttggatataatgaagaaata tctgatatgaagttcctaggtgatgaagaacagttcctcgcagtagctacaaatctcgag gaggttcgcgtttatgatgttgcaacaatgtcatgttcctacgtattagctggccataaa gaagttgttctttcccttgacacatgcgtatctagttctgggaatgttctaatcgtaact ggaagtaaagacaaaactgtaaggctttggaatgcaacaagccaatcttgcattggagtt ggtacaggtcacaatggcgatatcttagcggttgcttttgcgaagaagtctttcagtttc tttgtcagtggcagtggtgatcgtactctgaaggtctggagccttgatggtatctcagag gactcagaagagcccattaatctgaaaactagaagtgttgtcgctgcccacgataaagac atcaattctgtggctgttgctcgtaatgatagtttggtttgcactggctctgaggatcgg acagctagcatatggcgtctaccagacttggtgcatgttgttacactcaaaggacacaag aggcggattttttctgttgagttctcacctgttgatcagtgcgtaatgacagcatcaggt gataaaacagtaaaaatttgggctatatctgatggttcgtgcctcaaaacattcgaaggt catacctcaagtgtccttagggcttcgttcataactgatggcacccaatttgtctcatgt ggtgcggatggtttattgaaactttggaatgtgaacaccagcgaatgcattgccacatat gaccagcacgaggacaaggtatgggctttagctgttggaaagaaaacagaaatggttgca actggtggaggcgatgcagttattaatttatggcatgattccaccgcatctgataaagaa gacgaattccgcaaagaggaagaaacaatcttgagaggtcaagagctggaaaacgcggtg ttagatgccgaatacaccaaagccataagattagcatttgagcttcgtaggcctcacaaa gtttacgaactctttgctggactctgcaagaaaagagaatcagatgaccagattgtgaaa gctcttcaaggacttgaaaaagaagagttccgtttactctttgaatacctccgagaatgg aacacgaaaccaaaccggtgccacattgcccagtttgttctttaccaaaccttcaacata cttcctcccacggaaatcgttcaggtaaaaggaattggagaactccttgaaggtttaatc ccatattcccagagacatttcaataggatggacagatttgttagaagcagtttcttgtta gactacacactcggtgagatgtctgtgattgatccagagactgagactgagtatcgtaag gacaagaagatagaagaagaggtcatcccttctgtctctgcaatggaacaagacgaccag aagactccttcgaggaaacgaaagtctcagaaatcaaaagataaatcgaacaagaagaga ctcgttgagaaagctcagggaaatgtaatcgcagtttga

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