Raphanus sativus (radish): 108815937
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Entry
108815937 CDS
T06014
Name
(RefSeq) transcription factor-like protein DPA isoform X1
KO
K04683
transcription factor Dp-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108815937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108815937
03036 Chromosome and associated proteins [BR:
rsz03036
]
108815937
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
108815937
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108815937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
TPR_HPS5
SR-25
Motif
Other DBs
NCBI-GeneID:
108815937
NCBI-ProteinID:
XP_018443980
UniProt:
A0A6J0K990
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All DBs
Position
7:complement(355718..358101)
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AA seq
295 aa
AA seq
DB search
MEMDLFVTPEKQRNHPSSVSLGKTPVRRRLIVDDESEVVSEKKCQSRTSGGGLRQFSVMV
CQKLEAKKITTYKEVADEIISDFATIKQNAEKPLNDNEYNEKNIRRRVYDALNVFMALDI
IARDKKEIRWKGLPITCKKDVEEVKSYLQMDRNKIMNSVQKKAAFLKELREKVSSLESLM
SRNKEMVVKTQGPAEGFTLPFILLETNPHAVVEIEISEDMQLVHLDFNSTPFSVHDDAYI
LKLMQEHKLQQQQQQQNRVSSPSSTHQHSSSAHSSSSSCIASGTSGPVSWNSGIH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagatggatttgtttgtgacaccagagaagcagaggaaccatccttcttcagtgagc
ttggggaagactcctgtgagaaggagattgatagttgatgacgaatccgaggttgtctct
gagaagaaatgtcaatcaagaacttctggtggcggtcttcgccaattcagcgttatggtt
tgtcagaagttggaagctaagaagataactacttacaaggaggttgcagatgaaataatt
tctgattttgcaacaattaaacagaatgcagagaagcctttgaatgacaatgagtataac
gagaagaacataaggaggagagtgtatgatgcactaaatgtcttcatggcgttggatatc
atcgcaagggataaaaaggaaatccgttggaaaggccttcccattacctgcaagaaagat
gtggaagaagttaagtcttatttgcagatggatcgaaataagattatgaatagtgtgcaa
aagaaggctgctttccttaaagaattgagagaaaaggtatcaagtcttgagagtcttatg
tcgaggaacaaggagatggttgtgaagactcaaggacccgcagaaggatttactttacca
ttcattctacttgagacaaatcctcatgcagtagtcgaaatcgagatctctgaagatatg
caacttgtacacctcgacttcaatagcacgcctttctcggtccatgacgatgcttacata
ttgaaactgatgcaagaacacaagctgcagcagcagcagcagcagcagaacagagtttct
tcgccttcctctacacatcaacactcttcttctgctcattcttcctccagttcttgcatt
gcttctggaacctcaggccccgtttcctggaactctgggatccattga
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