Raphanus sativus (radish): 108816077
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Entry
108816077 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108816077
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108816077
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108816077
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108816077
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108816077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108816077
NCBI-ProteinID:
XP_018444151
UniProt:
A0A6J0K9Q7
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Position
2:complement(36432223..36435242)
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AA seq
615 aa
AA seq
DB search
MHEVSFPLDLSVFTRLIPTLFFLAVGLFYFLKNTAAKYLDIGGAAAGGFDRELISVGAED
CSVCGKFCTTKCSRCQSVRYCSAECQTSDWSLGHQRKCRDVGTTNLAASARNGLRFRASR
DCLERDQNKIRFKPREVLFPYEEFVKYFNWDYPELAPCGLMNCGNSCFANVILQCLSWTR
PLVAYLLERGHKNECMRDDWCFFCEFQTHVERASQSQLPFSPVNIISRLTNIGGTLGYGR
QEDAHEFMRYAIDTMQSVCLDEFGGEKMVPPRSQETTLVQYIFGGLLQSQVQCTVCNNVS
EQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNMYKCDRCSDYVKACKRLTIRRPP
NVLTIALKRFKGGRYGKLNKRISFPETLDLRPYLSQGGEGSDVYKLYAVIVHLDMLNASF
FGHYICYIKDFSGNWYRIDDSEIESVELEEVISQRAYMLLYSRIQARSSLSSTSLRSEVQ
EEKETDTLAMKACQKELVESSMVEAIDTSEDLVCEEESSLSSSSSTSSCSSPSVVTSECC
AEVERVDTLDSDSNPWIDDDDSAADHEEAVANGNIDREVKDQAVVTASVPSSCSKSQHPV
RDTDTKMIALNDVEC
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggttagctttccactggatctctctgtcttcactcgcctgatacctactctc
ttcttcctcgccgtcggtctcttttacttcctcaaaaacaccgccgctaagtacctcgat
atcggcggagccgccgccgggggtttcgacagggaattaatctctgtcggtgcagaggat
tgctctgtttgcggtaaattttgcaccaccaaatgctctcgctgccaatccgttcgatac
tgctcagcagagtgccagacgtcagattggagtttaggtcatcaaagaaagtgcagggac
gttgggactactaacttagcagcatctgccaggaatggtctgaggttcagagcttcaagg
gattgtctggagagggaccaaaacaagattaggttcaagccaagagaagttcttttccca
tatgaagagtttgttaaatattttaactgggactatccagagttggctccatgtgggctc
atgaattgtggaaacagttgttttgcgaatgtgattctacaatgcctatcatggacacgt
cctcttgttgcatacctactagagagaggccacaagaatgaatgtatgcgcgacgactgg
tgcttcttctgtgaatttcaaacccatgttgagagagcaagccaaagtcagctccctttt
tcaccggtaaacattatctcacggttaactaacatcggtggaactcttgggtatgggaga
caagaggatgctcatgagttcatgaggtatgcgattgatacgatgcagtctgtttgcctt
gacgaattcggtggagaaaaaatggtgcctcctcgctctcaagaaacaacacttgttcaa
tatatatttggcggtctcctccagtcacaggttcagtgtactgtttgcaacaatgtgtct
gagcaatacgagaatatgatggatttaacggtcgagattcatggagatgcggtgtctctg
gaggaatgtcttgatcagtttacagccaaagagtggcttcagggtgataacatgtacaaa
tgtgataggtgtagtgactatgtgaaggcatgtaagcgtctaacgattcggcgccctcca
aatgttctcaccattgccttaaaaagatttaagggaggaagatacgggaaactgaacaaa
agaattagttttcctgaaacattggatcttagaccttacttgagccaaggcggagaagga
tcagatgtgtataaactctatgcagtgattgtccatctagacatgttgaatgcatcgttc
ttcggccattacatttgctacattaaggattttagcggaaactggtatagaatagatgac
tccgagatagagagtgtggaattagaagaggtcatttctcaaagagcttatatgcttctc
tacagcaggattcaagctcggtcatcattatcgtctacgagtctcaggtcagaagttcaa
gaggagaaggaaacagacactttggcaatgaaagcttgccaaaaagagttagttgagagt
tcaatggtagaagctattgacaccagtgaagaccttgtatgcgaagaagagtcatcattg
tcgtcctcatcatcaacttcatcatgttcgtcaccatctgtggtgacctctgaatgttgt
gcagaggttgaaagggttgatacactggattctgattcgaacccttggattgatgatgat
gactctgcagcagatcatgaagaggctgtagcaaatgggaacatagatagagaggtaaaa
gaccaggctgtcgttacagcttcagttccatcgagttgttcaaaatcccaacatccggtg
agagatacagacaccaagatgatcgcgctcaatgatgtggaatgttaa
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