Raphanus sativus (radish): 108816425
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Entry
108816425 CDS
T06014
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz03015
mRNA surveillance pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108816425
09122 Translation
03013 Nucleocytoplasmic transport
108816425
03015 mRNA surveillance pathway
108816425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108816425
03041 Spliceosome [BR:
rsz03041
]
108816425
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108816425
Spliceosome [BR:
rsz03041
]
Complex C
Other components
EJC/TREX
108816425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
108816425
NCBI-ProteinID:
XP_018444535
UniProt:
A0A6J0K922
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All DBs
Position
1:complement(24021758..24023889)
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AA seq
199 aa
AA seq
DB search
MANLEPEAVDFEPEEDDLMDEDSAAADLSPRAANPRLRSTIAGANDDSAQRKTKGRGFRE
EKDSDRQRRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAGSYR
RRNMRSGRSQRSRSPRRRF
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctagaacccgaagcagtcgatttcgagccggaggaggatgacctgatggac
gaagacagtgcagcagctgatctctccccacgcgcagccaatccgcggcttaggtccaca
atagccggagcaaacgacgattcagctcagaggaagaccaaaggccgtggctttcgcgag
gagaaagattccgatcgccagcgtcgcctatcctctcgagatttcgactcactcggttcc
gatggtggtcctggccctcagcgatccatcgaggggtggatcattttggtcactggagtt
catgaggaggcacaggaagatgatatttccaatgcttttggtgattttggggagattaag
agtttgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttgattgaa
tatgagaagagcgaagaagcacagaatgctatcaaggcaatgaatggtgccgagcttctt
acacagaacgtcagcgttgactgggccttcagcaacggacccaatgctggatcttacagg
agaaggaacatgaggtctgggaggtcacagcgttcaagaagcccgagaagacgtttctga
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