KEGG   Raphanus sativus (radish): 108816425
Entry
108816425         CDS       T06014                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
rsz03015  mRNA surveillance pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108816425
  09122 Translation
   03013 Nucleocytoplasmic transport
    108816425
   03015 mRNA surveillance pathway
    108816425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108816425
   03041 Spliceosome [BR:rsz03041]
    108816425
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108816425
Spliceosome [BR:rsz03041]
 Complex C
  Other components
   EJC/TREX
    108816425
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 108816425
NCBI-ProteinID: XP_018444535
UniProt: A0A6J0K922
LinkDB
Position
1:complement(24021758..24023889)
AA seq 199 aa
MANLEPEAVDFEPEEDDLMDEDSAAADLSPRAANPRLRSTIAGANDDSAQRKTKGRGFRE
EKDSDRQRRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSNGPNAGSYR
RRNMRSGRSQRSRSPRRRF
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgaacctagaacccgaagcagtcgatttcgagccggaggaggatgacctgatggac
gaagacagtgcagcagctgatctctccccacgcgcagccaatccgcggcttaggtccaca
atagccggagcaaacgacgattcagctcagaggaagaccaaaggccgtggctttcgcgag
gagaaagattccgatcgccagcgtcgcctatcctctcgagatttcgactcactcggttcc
gatggtggtcctggccctcagcgatccatcgaggggtggatcattttggtcactggagtt
catgaggaggcacaggaagatgatatttccaatgcttttggtgattttggggagattaag
agtttgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttgattgaa
tatgagaagagcgaagaagcacagaatgctatcaaggcaatgaatggtgccgagcttctt
acacagaacgtcagcgttgactgggccttcagcaacggacccaatgctggatcttacagg
agaaggaacatgaggtctgggaggtcacagcgttcaagaagcccgagaagacgtttctga

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