Raphanus sativus (radish): 108816446
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Entry
108816446 CDS
T06014
Name
(RefSeq) protein argonaute 9
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108816446
03036 Chromosome and associated proteins [BR:
rsz03036
]
108816446
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108816446
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108816446
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108816446
microRNA pathway
RISC loading complex
108816446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
KOW1_SPT5
Motif
Other DBs
NCBI-GeneID:
108816446
NCBI-ProteinID:
XP_018444518
UniProt:
A0A6J0KAB4
LinkDB
All DBs
Position
7:6728442..6733541
Genome browser
AA seq
906 aa
AA seq
DB search
MDSNEAKGLPPPPPVVPPNLVPEHIKKTTLLPMARRSIGSKGVRTPLLTNHFRVNFNNAN
GHFYHYSVAIKYEDGSPMEAQRIFRKILEKVQETYLTELGSKYFAYDGQKNLFTVGALPS
NKMDFSVVLEDTISSRNNTGNASPNETNDADRKRSRRPHRSKKFVVEISYAARIPMQALA
SALQGRETDNLQDATRVLDVILRQNSARQGCLLVRQSFFHNDAQNFINIGGGVVGVRGFH
TSFRTTQRGLSLNIDTSTTMVVQPGPVINFLLANQNVNHPNYLDWNKARRALKNLRVKVS
PSNREYKITGLSEERCKYQMFTMNSKNNKGVVEEVQMTVYHYFTEIRGLKLEYSGDFPCI
NVGKPKRPTYIPIEHCELVSLQRYTKSLSSFQKASLVENSRQRPHERMASLANGLKNSNY
NADLVLQETGVSIGSSFIQVEGRVLPAPRLRMGNGEEFQPRNGRWNFNYKKLVEPATVTR
WAVVNFSAPCDTDSLISGLIRCGRSKGINVEPPYKDVFQENPGFKDAPPNIRVEKMFEQM
RSELGKKKPLFLLCILAEKKNSLVYGPWKKKNLIEHGIVTQCIAPPKNIKDQYITNVLLK
INAKLGGLNSLLAMERSQAIMPLVTQVPTFIVGMDVSHGSPSQSDVPSIAAVVGSREWPL
ISKYRACVRTQYRKVEIVDNLFKPVANEKGILVDEGIFWELLFDFYSSSGKRKPEHIIIF
RDGVSDSQFNQVLNIELDQMMQACKFVEENWEPKFTVIIAQKNHHTKFFRDGFPDNVPPG
TIVDSRICHAHNNDFYLCAHAGVMGTTRPTHYHVLYDEIGFSTDDLQELVHSLSYVYQRS
TSAISVVAPICYAHLAAVQMGTVMKFEDTSVSETSSIHAGITRSGEAPVPPMPMLNSEVA
SSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggattctaatgaagcaaaagggctaccacctcccccacctgtagttccaccaaacctt
gtacctgagcatatcaaaaagaccactcttcttccaatggctcggcgtagcatcgggtcc
aaaggagtgaggacacctcttcttaccaatcacttcagagtcaacttcaacaacgcaaat
ggccacttctatcattacagtgtcgctattaaatatgaagatgggagtccaatggaggct
caacgtatttttaggaagattcttgaaaaggttcaggaaacgtatctaacagaattagga
tccaaatactttgcttatgatggccagaagaatctgttcaccgttggtgctcttcctagc
aacaaaatggatttctcagtcgttcttgaagacacaatttctagcagaaacaacactgga
aatgctagtccaaatgaaacaaatgacgcagacaggaaaagatcaaggcggccacaccga
tccaagaagttcgtggttgagataagctatgctgcaaggatccccatgcaggcccttgca
agcgctcttcagggaagggaaacagataatcttcaagatgctacaagagtgttggatgtc
attttgagacagaattcagctaggcaaggttgcctactcgttcgccaatcattttttcac
aacgatgctcagaactttataaacattggtggaggtgtagttggtgtcagagggttccac
acaagcttcagaactactcagagaggcttatccttgaacatcgacacttcaactacaatg
gtagtacaaccaggccctgttattaatttccttcttgcaaatcagaatgtgaatcaccca
aactatcttgactggaataaggctagacgtgctctcaagaatctcagagttaaggtttcc
ccctcaaatagagaatataagataactggactaagtgaagagcgctgcaaatatcaaatg
tttactatgaattctaaaaacaataagggggtagttgaggaggttcagatgacggtgtac
cattacttcaccgagattcgcggtctcaaactggaatattcaggtgactttccttgcatc
aatgttggtaagccaaagcgcccaacttacattcccattgagcactgtgaacttgtgagt
ctacagcgttacacaaaatcgcttagtagttttcagaaggcttccttggtagaaaattct
aggcagaggccacatgaaagaatggcttcacttgccaacggtctgaagaatagcaactat
aatgctgaccttgtgttgcaagaaactggtgtaagcattggctctagcttcattcaagtg
gagggtcgcgttttaccagcaccaaggctgagaatgggcaatggagaggagtttcaacct
cgcaatgggcgttggaacttcaattataagaaacttgttgagccagccacggttactaga
tgggctgttgtgaacttctctgctccatgtgacacagatagtcttatttctggcctgatt
agatgtggaaggtcgaaaggaatcaatgtagaacctccatacaaagatgtctttcaagaa
aatcctgggtttaaggatgcaccacctaatatcagagtagaaaagatgttcgagcagatg
cgatctgaactaggaaaaaagaaacctctattccttctttgcattcttgcagaaaagaaa
aactctcttgtttatggtccatggaagaagaagaatcttattgaacatggaattgtgact
cagtgtattgctcctccaaaaaacataaaagatcagtatatcaccaatgttctcctcaag
ataaatgccaagctcggtggactgaactccttgttagctatggagcgctcacaagcaata
atgcctttagtaacacaagttcctaccttcattgttgggatggatgtatctcatggttcc
cctagtcagtctgacgtaccatcgattgctgcggttgtgggatccagagaatggccgctc
atctcaaaatatagggcatgcgtgcgcacacaatataggaaagtggaaattgttgataat
ctcttcaaacctgtcgccaacgaaaagggaatactcgtagatgaaggaattttctgggag
ctcttgttcgacttttactcaagctccgggaagaggaaacctgagcacattatcattttc
agggatggtgtgagtgattcacagttcaatcaagttcttaacattgaattggatcagatg
atgcaggcatgcaagtttgttgaagaaaattgggaacccaagttcacagtgatcattgca
cagaagaaccaccacaccaagttcttccgggatggattccctgacaatgttcctccagga
acaatagttgacagcaggatctgtcacgcacacaacaatgacttctatctctgtgcccat
gctggagtcatgggaactacaaggccaacacattaccatgttctctatgatgagattgga
ttttcgacagacgacctccaagaacttgttcattctctatcctatgtctaccagaggagc
accagtgccatctcagtcgttgcacctatttgttatgctcatttggcggctgtacagatg
ggaactgtgatgaaatttgaggacacgtctgtgtctgagacatcatcgatccatgctggg
atcacgagatctggagaagcccctgtgccacccatgccgatgttgaactcggaagttgca
agctccatgttcttctgctga
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