KEGG   Raphanus sativus (radish): 108816544
Entry
108816544         CDS       T06014                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03083  Polycomb repressive complex
rsz04120  Ubiquitin mediated proteolysis
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108816544
   04120 Ubiquitin mediated proteolysis
    108816544
  09126 Chromosome
   03083 Polycomb repressive complex
    108816544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108816544
   04121 Ubiquitin system [BR:rsz04121]
    108816544
   03036 Chromosome and associated proteins [BR:rsz03036]
    108816544
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    108816544
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     108816544
   Cul7 complex
     108816544
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108816544
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     108816544
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 108816544
NCBI-ProteinID: XP_018444617
UniProt: A0A6J0K9E7
LinkDB
Position
7:16229101..16229824
AA seq 155 aa
MIMLKSSDGESFVVEEAAARQSKIISFLVEEFPDQELPFTNLTSEILGKVMEYCKKHVVE
DDVCGDSSSSSSSSDDLKKWDAKFVGEIDQPMLMDLIMAANYLHIPSLLDVTCQKVADMI
AACNDEKEIRATFNIENDFTEEEVEAIRMENQYRN
NT seq 468 nt   +upstreamnt  +downstreamnt
atgatcatgttgaaaagctccgacggtgaatcgtttgtggtggaggaagcggccgctcgt
cagtcgaagatcatatcgtttctcgttgaagagttccccgatcaagaattaccgtttacg
aacctgacaagcgagatcctcggtaaagtgatggagtactgcaagaagcacgtggtggaa
gacgacgtctgtggtgattcttcttcttcctcctcctcctccgatgatctcaagaagtgg
gacgcgaagttcgtcggggaaatcgatcagccaatgctcatggatctcatcatggctgcg
aactacctacacatcccaagccttctcgatgtgacttgccagaaagttgctgatatgatc
gctgcatgcaacgacgagaaagagattcgcgcaacgttcaacatcgagaacgatttcacg
gaagaggaagtggaagcgattcgcatggagaatcaataccgtaactag

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