Raphanus sativus (radish): 108816740
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Entry
108816740 CDS
T06014
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL2
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108816740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108816740
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108816740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
108816740
NCBI-ProteinID:
XP_018444810
UniProt:
A0A6J0K9T2
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All DBs
Position
7:1213815..1218375
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AA seq
1374 aa
AA seq
DB search
MERTLVKAKRKELGISCMLNTEVGAVLAVIRRPISESYLSPQETDHCDSSVQQSLKSLRA
LIFNPQQEWRTIDPLVYLSPFLEVIQSDEIPASATAVALSSILKILKIEIFDEKSPGARD
AMNSIVSGITSCRLEKTDSISEDAVMMRILQVLTGVMKHPASELLEDQAVCTIVNTCFQV
VQQSAGRGDLLQRNGRYTMHELIQIIFSRLPDFEVRGEEGGEDSESDTDEIDMNSGYGIR
CCIDIFHFLCSLLNVVEVVENSEGTSVHTADEDVQIFALVLINSAIELSGDAIGQHPKLL
RMVQDDLFHHLIHYGASSSPLVLSMISSCILNIYHFLRKFVRLQLEAFFSFVLLKVTAFT
GFLQLQEVALEGLINFCRQPEFIVEAYVNYDCDPICRNVFEETGKVLCRHTFPTSGPLTS
MQIQAFEGLVILIHNIADNMDREEDEGGDEEDANTIKPSPVEINEYIPFWIEKPKEDFET
WVEHIRVRKAQKRKLAIAANHFNRDEKKGLEYLKYNHLVSDPPDPMALASFFRFTPGLDK
TMIGDYLGDPDELHLSVLKSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFS
ERFYDQQSSDIFASKDTVHILCYSLIMLNTDQHNPQVKKKMTEDEFIRNNRAINAGKDLP
REYLSELFQSISTTAFALSTHSGPVEMNPNKWIELMNRTKTTQPLSMCQFDRRIGRDMFA
TIAGPSIAAVSAFFEHSDDDEVLHECVDALISIARVAQYGLEDILDELIASFCKFTTLLN
PYTTPEETLFAFSHDMKPRMATLAVFTLANSFGDSIRGGWRNIVDCLLKLRKLQLLPQSA
IEFETADEEASSENDLNMLAGQENKYNRRQGSSLMGRFSHFLALDSVEESVALGMSEFEQ
NLKVIKQCRIGQIFSKSSVLPDVAVLNLGRSLIYAAAGKGQKFSTAIEEEETVKFCWDLI
IAVALSNIHRFSMFWPSYHEYLLNVANFPLFSPIPFVEKGIPGLFKVCIKILASNLQDQL
PEELIFRSITIMWKIDKEIIDTCYDTITEFVSKIITEHSASLQTQIGWKSVLQLLSLCGR
HPETKEQAVDALIGLMSTNASHLSQSSYAYCIDCSFSFVALRNSAVEKNLTILDLMTESV
TMLVQWYKTASTETTGNNYSVASNTSSSSSVEENSLRGVNFVHHLFLKLSEAFRKTTLAR
REEIRNRAVTSLERSFIMAHEDLGFTPSGCIYCIDHVIFPTIDDLHEKLLDYSRRENAER
EMRSMEGTLKTAMKMLKNVFLHYLEQIVGSAEFRTFWLGVLRRMDTCMKADLGEYGDNML
QEVVPELLTTMIGTMKEKEILVQKEDDDLWEITYIQIQWIAPSLKDELFPDEDL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaccctggtgaaagcaaagcggaaagagctagggatatcatgcatgcttaac
acagaggttggtgcagtccttgctgtcatacgtagacccatctcagagagttacctttct
ccccaagaaacagaccattgtgattcatcagtccaacaatctctcaaatctttgagagct
cttatcttcaaccctcagcaagaatggcgcaccatcgatcctttggtttacctctctcct
ttcctcgaagtcattcaaagtgatgagatccctgcaagcgccacagcggtggctctgtcc
tcaatcttgaagatccttaagattgagatctttgatgagaaaagtcccggtgctagagat
gctatgaactctattgtctctgggatcactagctgtcgtcttgagaagacagattcgata
tccgaagatgcagtgatgatgaggatccttcaagttctaactggagtcatgaaacatcca
gcctcggagttactagaagaccaagctgtttgcacaattgtcaacacatgtttccaagtg
gtgcaacaatctgctggtagaggagatctcctccaacgtaacggaagatacacaatgcac
gaactgattcagatcatcttctctaggctacctgactttgaagtcagaggagaagaaggt
ggtgaggattcagagtctgacaccgacgaaatcgacatgaacagcggatatggaatacgt
tgttgcatcgacatttttcacttcttatgttctttgctcaacgttgtcgaggtggtcgag
aactcggaagggacaagcgtccacaccgcggacgaggatgtgcagattttcgctttggtt
ttgatcaacagcgctattgagttaagtggtgatgctattggacaacatccaaaacttcta
agaatggttcaagatgatctgtttcatcatctgatccattatggagcttcttcaagccct
cttgtgctctctatgatctctagttgtatccttaacatatatcacttcctccgcaagttt
gtgaggctacaacttgaagctttcttctcctttgtgctgctcaaagttacagctttcaca
gggttccttcagttacaagaagttgcactcgaagggctaatcaatttttgtcgacaacct
gagttcatagttgaagcatatgtgaactatgattgtgatcccatatgcaggaatgttttt
gaagagaccggtaaagttctatgcagacacaccttccctacatccggtcctttaacctct
atgcaaatccaagcttttgaaggtcttgtgatcttgattcacaacattgctgacaatatg
gatagagaggaagatgaaggtggtgatgaagaagacgccaataccattaagccaagccct
gttgagattaacgagtacatacccttttggatagagaagccaaaagaggattttgagaca
tgggtggagcatataagagtgaggaaagcacagaagaggaagctagctatagctgctaac
catttcaacagagatgagaaaaaaggtttggagtatttgaagtataaccacttagtctca
gatcctcctgatccaatggcattagcttctttcttcagattcacgccaggtttagacaag
acaatgataggagattaccttggagaccctgatgagctacacctcagtgttctcaaaagc
tttacacatacatttgagttcacaggaatgaatcttgacactgccttgaggacattcttg
gagtcgtttcggttaccaggagagtctcaaaagattgaacgtatgattgaagctttctcc
gagaggttctatgaccaacagtcatctgatatctttgcaagcaaagatactgttcatatc
ctctgctactcacttatcatgctcaacacggatcagcataaccctcaggttaagaaaaaa
atgactgaagatgagttcatccgcaacaacagagccatcaacgcagggaaagatcttccg
agagagtacctctcagagctattccaatccatttcaacaaccgcatttgccttatctacg
cattctggtccggtggagatgaatccaaacaaatggattgagctgatgaacagaacaaag
accacacagcctttgagtatgtgccagtttgatcgtcgaataggaagagatatgttcgca
accatcgcaggtccatctatagcagctgtttccgccttcttcgagcattcagatgacgac
gaagtgcttcacgagtgcgttgacgcactgatctctatagccagagttgcacagtacggc
ctagaagacattctcgacgagctgatcgcttcgttttgcaagttcacaacgctgctgaac
ccttacaccacgcctgaagagacactctttgcgtttagccacgacatgaaacctaggatg
gccactcttgcggttttcacgctcgctaacagctttggagattccatcagaggagggtgg
aggaacattgtggactgtctcctgaaactcagaaagctccagcttcttccgcagtcagcc
atcgagttcgagacagcagatgaagaagcgtcatcagaaaatgacttaaacatgcttgcg
ggccaagaaaataaatataacagaagacaagggtctagcctaatgggaagattctcacat
ttcttggccttggacagcgtggaagaatctgtagctctcgggatgagcgagtttgagcag
aacctcaaagtcattaaacagtgcagaataggtcaaatattcagcaaaagctcggtgtta
cctgacgtggcggtattaaacctaggccgttctctgatctacgcagctgcggggaaaggg
caaaagttcagcacggcgatagaggaagaagagacggtcaagttctgctgggacttgatc
atagccgtggcgttatccaacatccaccggttcagcatgttctggccaagctaccatgag
tatctactcaacgtagcgaacttccctctcttctcaccgattccgttcgtcgaaaaaggc
atcccgggcttgttcaaggtctgcatcaagatccttgcctctaacctccaagaccagcta
ccagaggagctgatcttcaggtctataacgataatgtggaagatagataaagagattata
gacacatgttacgacacgataacagagtttgtcagcaagattattacagaacactccgct
agtctccagactcagattggttggaaaagcgttttgcagttgctttctttgtgcggaaga
catcccgagaccaaagagcaagcggtcgatgctctcatcggtttaatgtccaccaacgcc
tcgcatctttcgcagtctagctacgcttattgcatcgactgctccttcagcttcgtggcg
ttgagaaacagcgctgtggagaagaacttgacgatactagacctcatgacagagtcggtc
acgatgctggtacaatggtacaagacagcttctacggagacgacgggaaacaactacagc
gtagcgagcaacacgagcagctcgtcgtcggtggaagagaacagtctgagaggagtcaac
ttcgttcaccacctcttcctcaaactctctgaagccttcaggaaaacaaccctagcgcgc
cgcgaagagataaggaacagagcggtgacgtcgcttgagagaagcttcatcatggcgcac
gaggatctcgggttcacgccttcgggttgcatctactgcatcgaccacgttatcttcccg
acgatagatgacttgcacgagaagctattggactattcgaggcgcgagaacgcggagaga
gagatgaggagcatggaagggacgttgaagacagcgatgaagatgctcaagaacgtgttc
ttgcattacttggagcagattgtggggagcgctgagttcaggacgttttggttaggagtg
ttgaggaggatggatacgtgtatgaaggcggatttgggagagtatggtgataacatgctt
caagaggtggtgcctgagcttttgactacaatgattgggacgatgaaggagaaagagatt
ttggtgcagaaggaagatgatgatctttgggaaattacttatattcagattcagtggatt
gctccttctcttaaagatgagttatttccagatgaagatttgtag
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integrated database retrieval system
