Raphanus sativus (radish): 108816851
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Entry
108816851 CDS
T06014
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108816851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108816851
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108816851
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
108816851
NCBI-ProteinID:
XP_018444912
UniProt:
A0A6J0KD35
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Position
7:15620231..15622810
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AA seq
668 aa
AA seq
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MEARDEDAGGKVIGLIERATKPSAQEVDPRLLKAIKSTLRYSDSEVRLGAKTLMELMKHN
HSQVRLLTLLIIDELFMRSKLFRTLIVEKFDQLLSLSVGFRTSLPLPAPPAVATVLRTKA
IEFLEKWNLSFGLHYKEIRLGFDHLKNTLKLKFPDLQANAARRQREALERETRTKEILRG
KFESLRDGFGVLKGEIEETIKEIKEGLEIVQWRGDDGVPLAILDEEDYEEIRCSHLRQIR
MDSLMQSDKVEETSENRVVFDVLREQGKLLMKKHLVSVQDGISLLIRVDVSDNRTRDSML
KELIDIRNSILATEKKCEQAGFTISRMIDTGEKEEEEEDIWEEDDGKVVTDPVKKVAPLR
RVQNGEGSSFRSPSEANRSTSEPSSNKASSSKTVGRSGDTLRDKLISEAPVVNWGSQLSS
WDSTTEARANHRGLEVENHWGRVDQDAVIPADKIAELNLQATVYREERTEIPPCHAPLKK
GGLCQRRDLRACPFHGPIVPRDNEGNPIIKESPLDHESENQTSSSSGINQEDDVPMDETT
SDSDPNQLARQIAKQALKNIREKDREELRKKAKRAKHAKVKEHNFSVLRDAALASTSKSA
VIDEEFDRVFAERKNKKQTFSLTRRKKTTAKDRISERLLSNRAKGTKPKQLPQGNDDEKH
RETSANQW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagagacgaagacgcgggaggaaaagttattgggttgatagagcgagcgacg
aaaccgtctgcgcaagaggttgacccgaggctgctcaaagcgatcaaatcaactcttcgc
tattccgattcggaggtccgactcggtgccaaaaccctaatggagctcatgaaacataac
cactctcaggttcggttattgacgcttttaatcatcgacgagctattcatgagatcaaag
ctcttcagaacactaatagttgagaagttcgatcagcttttgagtttaagtgttgggttt
agaaccagcctgcctcttcctgcaccacccgctgtcgccaccgttttgcgtacaaaggct
attgagttcttggagaagtggaatctttcgtttgggttacactacaaggagattaggctt
ggtttcgatcaccttaagaacaccctcaagctcaagttccctgatctgcaggcaaacgct
gcgcggagacagagagaggcgctcgagagagagacgaggacgaaggagattttgagaggc
aagtttgagtctttgagggatgggtttggagtgttgaaaggtgagattgaggagacgata
aaggagatcaaggagggtcttgagattgttcagtggagaggggatgatggtgttccactt
gcgatcttagatgaggaggattacgaggagatacggtgttctcatctgaggcagattcgt
atggattcgttgatgcagtctgataaggttgaggagactagtgaaaacagagtggtgttt
gatgtgttgagggaacaggggaagcttctgatgaaaaagcatttggtctcggttcaagat
gggatctctcttctcataagggttgatgtaagtgataacaggaccagagattccatgttg
aaagagttgattgatattaggaatagcatattggcaactgagaagaaatgtgagcaagct
ggttttacaatctcaagaatgattgacactggggagaaagaagaagaagaagaagatatc
tgggaggaagatgatggcaaggttgtaactgatccagtcaaaaaggtggctcctttgagg
agagttcagaacggtgagggttcgtcctttcggtcaccaagtgaagcaaataggtctaca
tcagaacctagctccaacaaggcgtctagtagtaaaacggttggaagaagtggtgacact
cttagggataagctaatctctgaagctcctgtggtgaattggggatcacagttgagtagt
tgggactcaactacggaagctcgagctaaccaccgaggcttagaggtcgagaaccactgg
ggcagggtggatcaagatgctgtaattccagcagataaaatagcagaactaaatcttcaa
gcaactgtttatagagaagagaggacagagatacctccatgccatgctcctctaaagaaa
ggtggtctttgccagagaagagatctacgagcctgcccgtttcatggacccattgtacct
cgggataatgaaggaaaccccataatcaaggaatctccattagatcatgagagtgaaaac
caaacctcttctagttcagggatcaaccaggaggacgacgtgcctatggatgaaacaact
tcagattctgatcctaaccagttagctaggcaaatagcgaaacaagctctgaagaatatc
agggagaaagacagagaggagttaaggaaaaaagcaaagcgggcaaagcatgctaaggtt
aaggaacataacttttcagttctgcgtgatgctgctttagcgtcaacgtctaaatcagct
gtcatcgacgaagagtttgatagagtttttgctgaaaggaaaaacaagaagcaaaccttt
tccttgacacggcgtaagaaaacaacggctaaagatagaatatccgagagactgttaagt
aaccgagcaaaaggtactaaaccgaagcagttgcctcagggcaatgatgatgagaagcac
agggaaacatcggctaaccagtggtaa
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