Raphanus sativus (radish): 108816857
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Entry
108816857 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108816857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108816857
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108816857
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108816857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
108816857
NCBI-ProteinID:
XP_018444921
UniProt:
A0A6J0KBS0
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All DBs
Position
7:15623424..15625401
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AA seq
325 aa
AA seq
DB search
MDLDSMDCASTVDITNDEEIHQDRHSYASVSKHHSNNSNANAAASGLLPTTTSVHELLEC
PVCTNSMYPPIHQCHNGHTLCSTCKNRVHNRCPTCRQELGDIRCLALEKVAESLELPCKY
MSLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECSVMGDIPFLVAHLRDDHKVDMHSGC
TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEAR
NYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRV
TGRIWKEQQQQSGEGGGGACIPNLS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatagcatggactgtgcttcaaccgtagatatcacaaatgacgaagagatc
caccaagatcgccattcctacgcatcggtttcgaagcatcacagtaataacagcaacgcg
aatgctgctgcttctggtcttcttccgacaaccaccagtgttcacgagcttctcgaatgt
cctgtctgcaccaattctatgtaccctcctattcatcagtgtcacaacggacatactcta
tgttcaacttgtaagaacagggttcacaatcgctgccctacttgtagacaagagctcggt
gatatccgttgcttggcactcgaaaaagtagcggaatctcttgagctaccttgcaagtat
atgtcgcttggctgtcctgagatattcccttattacagtaagctgaaacacgagactgtg
tgtaacttcaggccgtataactgcccgtacgctggttccgagtgttctgttatgggtgat
atccctttcttagttgctcatctgagggatgatcacaaggtggatatgcattctgggtgt
actttcaaccatcgttatgtcaagtctaatcctcgtgaagtcgaaaacgccacgtggatg
ttaactgtctttcactgctttggtcaatacttctgtctccactttgaggcattccagctc
ggtatggctccagtgtacatggcgttcctgcgtttcatgggggacgagacagaagctcgg
aactacaactacagtttagaagttggaggttatggtcggaagctgatttgggaaggaaca
ccgagaagcgtaagagacagtcacaggaaagttagagacagtcatgatgggctaatcata
cagagaaatatggctctcttcttctcgggtggagacaggaaagagctgaaactgcgagtt
actggaagaatctggaaagagcagcagcagcaaagtggtgaaggtggaggaggagcttgc
atcccgaacttgtcttaa
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