Raphanus sativus (radish): 108816889
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Entry
108816889 CDS
T06014
Name
(RefSeq) pectinesterase PPME1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108816889
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108816889
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GFIT
Motif
Pfam:
Pectinesterase
Pect-lyase_RHGA_epim
DUF1565
Motif
Other DBs
NCBI-GeneID:
108816889
NCBI-ProteinID:
XP_018444951
UniProt:
A0A6J0KBV8
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Position
7:5289598..5291385
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AA seq
365 aa
AA seq
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MRCTNVSILLALVMVFVTQMVLADDVTPIPEAKVQVEQWFKTNVAPLPSRKGLDPALVAA
EAEPRTITVDPKGGEFKTLTDAIKSVPAANTKRVIIKIAPGEYREKVTIDRNKPFITLMG
DPKAMPVITFDGTAAKFGTVDSATLIILSDYFMAVNIVVKNTAPAPDGKAKGAQALSMRI
SGNKAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSLYLGTQLHVVGDGI
RVITAHAGKTADEKTGYSFVHCKVTGVGQGIYLGRAWMSHPKVVYAYTEMTSVVNPSGWQ
ENKIAAHDKTVFYGEYKCVGEGAQTDKRVPFTQKIDTTVANRFLTLGYIEGSKWLLPPPA
VAASI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagatgcacaaacgtgtccatattattagccttggtgatggtgtttgtcacgcagatg
gtgttggcagatgatgtaacaccaattccagaggccaaagttcaagtggagcagtggttc
aagaccaacgtagctcctttgccttcgcgtaaaggtctagatcctgctctcgtagctgct
gaggctgagccacgtaccatcaccgtggatccaaagggaggtgaattcaaaacactaacg
gacgcaataaagagcgttcctgcagcgaacacaaagcgtgtgatcatcaagatagcccct
ggcgaatacagagagaaggtcaccatcgacagaaacaaacccttcattacattgatggga
gatcccaaggccatgccggttattactttcgacggtactgccgcaaagtttggtaccgta
gatagtgccacactcattatcttatccgactatttcatggctgtcaacatcgtcgttaag
aatacagcgccggcaccggatggtaaagcgaagggagcacaagctttatctatgagaatc
tctggaaacaaggctgctttctacaactgtaaattctacggattccaagacacaatttgt
gacgataccggaaaccatttcttcaaggattgttacgtcgaagggacattcgatttcatc
ttcggaagcgggacctctctttacttgggtacacaattgcacgtggtgggagatggcatt
agagtgataacagcgcatgcgggaaagaccgcagacgagaagaccggatactctttcgtg
cattgcaaggtgactggagttggtcaaggaatctatttgggtagggcatggatgagccac
cctaaggttgtctacgcctacaccgagatgaccagcgtagtcaacccatctggatggcaa
gaaaacaagatagccgcacatgacaagaccgtgttctatggagagtacaagtgcgtagga
gaaggagcacagacagacaagagagttccatttacacaaaagattgacactactgtagct
aaccgtttccttaccctcggctacattgaaggatccaagtggcttctcccacctcccgct
gttgcggcttcaatatga
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