Raphanus sativus (radish): 108816898
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Entry
108816898 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108816898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108816898
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108816898
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108816898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Beta-prop_NOL10_N
zf-Di19
zf-C3HC4
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
108816898
NCBI-ProteinID:
XP_018444960
UniProt:
A0A6J0K7P0
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All DBs
Position
7:complement(16853853..16856745)
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AA seq
311 aa
AA seq
DB search
MAPGGSALKEVLESTSTGMDYEVKMAKAEVNSNTNNKPTKSGSAGVGKYGMHSNNGVYEL
LECPVCTNLMYPPIHQCPNGHTLCSNCKARVQNTCPTCRYELGNIRCLALEKVAESLEVP
CRYQSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECSVTGDIPTLVVHLKDDHKVDMH
DGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDEN
EAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELK
LRVTGRIWKEE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtccttgaatctacttctactggaatggat
tacgaggttaaaatggcaaaagccgaagttaatagtaatactaacaacaaacctacaaag
tcagggagcgcaggagttggaaaatatgggatgcattcaaacaatggtgtatacgagctt
cttgagtgtccagtatgtactaatctaatgtaccctccaattcatcagtgtccaaatggc
cacactttatgttcaaactgcaaagcaagagtgcagaacacttgccctacgtgtcgctac
gagcttggtaacataagatgcttagctcttgagaaagttgcagagtccttagaagttcca
tgccggtaccaaagtttgggttgccatgacattttcccttactacagcaagcttaagcac
gagcagcactgcaggtttaggccttacgcttgcccttatgctggctctgagtgttcggtt
acaggtgacatccccacccttgttgttcatctcaaagatgatcataaagtcgatatgcat
gacgggtgcactttcaaccaccgttatgttaaatcaaacccacatgaagtcgaaaatgct
acatggatgcttacggtgttcaactgttttgggagacagttctgtttgcactttgaggcg
ttccagcttgggatggctccagtttacatggctttccttcgtttcatgggtgatgaaaac
gaggcaaagaagttcagttacagcttggaagtaggagctcatggacgtaaactaacatgg
caagggatccctagaagcatccgtgacagtcacaggaaagtcagggacagtcaagacggt
ctcatcatccctagaaacctcgcactatacttctctggaggtgataggcaagaactcaag
ttgagggtgaccggtcgaatctggaaagaagagtaa
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