Raphanus sativus (radish): 108816955
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Entry
108816955 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108816955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108816955
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108816955
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108816955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF2457
Drc1-Sld2
Sigma70_ner
ZnF_RZ-type
O-antigen_lig
MscS_TM
DARPP-32
RPA43_OB
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108816955
NCBI-ProteinID:
XP_018445028
UniProt:
A0A6J0KBT8
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All DBs
Position
7:9594479..9595884
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AA seq
366 aa
AA seq
DB search
MMKETNREKGVAGEASSSSSRRKRQRLASVAEDEGRGVTASVDEDEVIPPEARSGTLLDL
DLLDCPVCLEALTKHVFQCDNGHIACSSCCLKLRNKCPACALPIGNNRCRIVERIVESVT
VPCPNAKHGCTEKFSYGKESAHEEECGFSLCYCPAPDCNFAGVYKDLYSHYDADHKDTTR
RFVCGTPHHTYLAPGPGPKISVLQEYRVGPLVVVQCFEGAQGMSLTVNCIAPSAPGVGKF
SFDLTHSLGRQTVTFGSTEMNRIQRVNLETPEEDFMSIPSYLVSPIMVKNLRICIRRLEE
EEEEEEEEEEEEEEAGEEDGEEEDQEEADEDYDDDEEEADEVDVVNNVRRSTRQKKVNSK
YQNKVK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagagacgaacagggagaaaggcgtcgctggagaagcgtcgagtagcagcagc
cgccgaaagagacagcgacttgcttccgttgctgaagatgaaggcagaggagtaacggcg
agtgtagacgaagatgaagtgatacctccggaggcacggtcggggactctgctcgatttg
gaccttctcgattgtcccgtttgcttggaagcactgaccaaacatgtctttcagtgtgac
aacggacacatagcttgttcgtcttgctgtctcaaactgagaaacaaatgccctgcctgc
gctttacccatcggtaacaaccgatgcagaatcgtggagagaattgtcgaatcagtcacc
gtcccgtgtccgaacgcaaaacatggttgtacggagaagttctcttacggcaaagaatca
gcacatgaggaagaatgcggtttctctctttgctactgccctgcaccggactgcaacttc
gctggtgtgtacaaagatctctacagtcactatgatgctgaccacaaggatacaacgagg
cgtttcgtgtgtggcactccccaccacacatatcttgcccctggcccaggcccgaagatt
tcagtccttcaggaatacagagttggtccgttggttgtggttcagtgtttcgagggggcg
caaggaatgtctttgactgtgaactgtatagctccgtctgctccaggagttgggaagttt
tcctttgatttgacccactctttgggacgtcagactgtgacgtttggatcgacggagatg
aataggattcagagagtgaacttggaaactcctgaggaagactttatgtcgattccttcc
tatttggtttcaccgattatggtgaagaacttgcgtatttgcatccgccggctagaagaa
gaagaagaagaggaagaggaagaggaagaagaagaagaagaagctggtgaagaagatggc
gaagaagaagaccaagaagaagctgatgaagattatgatgatgatgaagaagaagctgat
gaggttgacgttgttaacaatgttcgcaggtcaactcgtcagaagaaggttaactccaaa
taccaaaacaaagtcaagtaa
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