Raphanus sativus (radish): 108816986
Help
Entry
108816986 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108816986 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108816986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108816986
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108816986
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108816986
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108816986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
108816986
NCBI-ProteinID:
XP_018445061
UniProt:
A0A6J0KC50
LinkDB
All DBs
Position
7:complement(1711672..1714234)
Genome browser
AA seq
412 aa
AA seq
DB search
MRPHYNRPQRPQQQQNNGYPNQQQQNGYHQNPGMMMMNPQMMMMMMGHMNNMPMHPHQPI
HQFAFPNHPINQLHPNHLGSLHSIQPTYYPPPYTPVPPPPQNQNHQSRPPGFSEARPQVQ
SVGNVNNTNNFNPRGSDSRNSFTKQQNFRGPGQGSQSYQGDNAKKKFGFNKAHKGKGKNN
KMAPRIYGSDAGIAEDTKRPYIPNYPPKEVQQWRQARRKNFPTKLNVEKKIKKNDSNSGL
DDEAKLRRQQLREVLAKQRELGVEVAEVPSHYLSNPVEQVNGDNSGQFQNKDGRKGRFRH
NKRRYGGKDKFDKRRKFQDKDSSEESSTITTREPTLLEKLLSADIKKDKIQLLQVLRFME
MNSFFKESPEGPLKFPLVMVEETGCEHAEEVLSDDDDVDESGDDDSCDEASD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcactacaaccgcccgcagcgaccgcaacaacagcagaacaatgggtaccca
aatcaacaacaacagaatgggtatcatcagaacccagggatgatgatgatgaatccacag
atgatgatgatgatgatgggtcacatgaacaacatgccaatgcatcctcatcagccgatt
caccagtttgctttcccaaaccaccctatcaaccagctgcatccaaaccacctggggagt
cttcactcaatacagcccacttattatccgcctccgtatactcctgttccacctccacct
caaaatcaaaatcaccaatcgcggcctccaggtttctcagaggcgagaccacaggtgcag
tctgtaggaaacgtcaacaacaccaacaatttcaatccgagagggagtgattctcgtaat
agttttacaaaacaacagaacttcagaggccctggtcaaggatctcagtcgtatcaagga
gacaatgcaaagaaaaagtttgggttcaacaaggctcataagggaaaagggaagaataat
aagatggcacctaggatttatggatctgatgctggtatcgctgaagatacgaaaagacca
tatattccgaactatcctccaaaagaagttcagcaatggcgtcaagctcggcgtaagaat
tttccaacgaaactcaacgttgaaaagaaaataaagaaaaatgattcaaactccggcctt
gacgatgaagcaaaactgcgtcgtcagcaactccgggaagtgttagcaaagcagcgtgag
ctaggcgttgaagtagcagaagtcccttcacactatttatccaatccagttgagcaagtt
aatggagacaacagtggacagttccaaaacaaggatggcaggaagggaagatttagacat
aacaagagaagatatggtggtaaagacaagttcgataaaagacggaagttccaagacaaa
gattcatctgaagaatcttctaccatcacgacgagagaacctacattgcttgagaagctc
ctgagcgctgacataaagaaagacaagatccagttgttacaggtcctccgcttcatggaa
atgaactcattcttcaaggagtcgccagagggacctctgaagtttcctttggttatggta
gaagaaacgggctgtgaacatgccgaggaagttttatccgatgatgatgatgtggatgag
agtggtgatgatgactcatgtgatgaagcgtctgattaa
DBGET
integrated database retrieval system
