Raphanus sativus (radish): 108817093
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Entry
108817093 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817093
04121 Ubiquitin system [BR:
rsz04121
]
108817093
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108817093
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108817093
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108817093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-ANAPC11
zf-C3HC4_3
zf-C4
zf-Nse
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108817093
NCBI-ProteinID:
XP_018445202
UniProt:
A0A6J0KB53
LinkDB
All DBs
Position
2:21259719..21261067
Genome browser
AA seq
395 aa
AA seq
DB search
MPSTPPTTPITTSYWCYSCTRFVSVWAEHGATTDGLACPHCDGGFIEEVTDSSSPAAATG
LTTPASDEVRSVNSSRRSVIRRRRSSRRPSFNPVIVLQGGGAGEGEEGDAAARERRAFEF
YYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEATGGGIGRSGNPPASKSAIESLP
RVEISGRHLTAEANCAVCTEVFEAEETEAREMPCKHIFHEDCIVPWLSIRNSCPVCRFEI
PSESNQRSSEEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGLGGNS
EGPRRISWVRGNGGVESDGSNGGGSGSGGRLRRMVRGVVSLMRRVRPNRGSNNSSSAAVS
SSDSEVESRVMDRSNSVLRRYFGRNRSNRGSSVLH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaacgccgccgacaacacccatcacgacgtcgtattggtgttacagctgcacg
cgattcgtcagcgtctgggccgaacacggcgccaccaccgacggcctcgcttgtccacac
tgcgacggcggtttcatcgaagaagtaaccgattcctcctcccccgccgccgcaaccgga
ttaaccaccccagcttccgacgaagttagatccgtaaacagcagccgtagatccgtgatc
agacggcggagatccagtcgccgcccgtcgtttaaccccgtcatcgtcctccaaggcgga
ggcgccggcgagggagaagaaggagacgccgcggctagggaacggcgcgctttcgagttc
tactacgacgacggatccggatcgggccttcgaccgcttccggattccgtatcggagatc
ttgatgggatccggattcgagcggttgctcgagcagctgagtcagatcgaggcgacgggg
ggcggaatcgggagatccgggaacccgccggcgtcgaaatcggcgatcgagtctctgccg
agagtcgaaatctccggtcgccatctaacggcggaggcgaactgcgcggtttgcacggag
gttttcgaggcggaggagacggaggcgcgtgagatgccgtgtaagcatatatttcacgag
gactgtatagtgccgtggctctcgatacggaactcgtgcccagtctgtagattcgagata
ccttcggagagtaaccaacggagcagcgaggaggaggataacgctgttgggatgacgata
tggagactccccggaggggggtttgctgtcgggaggtttaacgcggcgatgagagatggg
gagagagtgttgccggtggttttgacggagatggatggtggtgggcttggtggtaacagc
gagggtcctagacggatctcgtgggttagaggtaacgggggagttgaatcagatggcagt
aacggtggtggatccgggtcgggagggaggttgagacggatggttcgtggagttgtgtct
ttgatgaggagagtgagacctaaccgtgggtctaataattcctcttctgctgctgtgtcg
tcttcggacagtgaagtggaatctagggttatggatcggtcgaattcagtgctgaggaga
tactttgggaggaacagaagtaacagaggttcttcagttctgcattga
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