KEGG   Raphanus sativus (radish): 108817163
Entry
108817163         CDS       T06014                                 
Name
(RefSeq) WD repeat-containing protein 26 homolog
  KO
K22382  WD repeat-containing protein 26
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108817163
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108817163
   CTLH complex
    108817163
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I LisH_WDR26 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EML ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP WDR54 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Tricorn_2nd Beta-prop_VPS8 RMC1_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 108817163
NCBI-ProteinID: XP_018445279
UniProt: A0A6J0KE43
LinkDB
Position
7:4827059..4830287
AA seq 596 aa
MGVVEDTEPPLKRAKRDETNGFSSSSGNSSVRGSSRCSVTDSSLGDLMARPLTSSSSSRG
DDDDTTVGSKGVIKKSEFVRIITRTLYSLGYGKAGAMLEEESGIPLHRSFVETFLQQVKE
GKWDESVVTLHRIGLLDEKAVKSASFLLLEQKFLELLRFEKIADALGTLRNEIEPLRINT
KRVHELASSFIISPSASSGLGKENVSSRSKVLEELQSLLPASVIIPENRLETLVENSLHI
QRDACVFHNTLDSDLSLYSDHQCGKHQIPSQTVQILESHTDEVWFLQFSHNGKYLASSSK
DQTAIIWEINADGHMSLKHKLVGHQKPVTAVLWSPDDRQVLTCGAEEVIRRWDVDSGDCA
HTYEKGGGIGPISCGWYADGKGIIAGMTDRSICMWDLDGREMECWKGQRTQKVSDIAMTD
DGKWLVSVCKDSVISLFDREATFERLIEEEDTITSFSLSNDNKYVLVNLQNQEIRLWSIE
GDPKIVTRYKGHKRSRFLIRSCFGGYEQGFIASGSEDSQVYIWHRSTGKLIIELPGHAGA
VNCVSWSPTNLHMMASASDDGTIRIWGLDRINPHNQKKQVQGSSSNGVVLRQCNGN
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgggagttgtggaggatactgaacctcctttgaaacgtgctaaacgcgacgagaccaac
ggcttctcctcctcctccggtaactcttctgttagaggtagtagtcgttgtagcgtgacc
gactcttctttgggagacctgatggcaaggcctctcacctcctcctcctcctcccgaggg
gatgatgatgacactactgtcggctccaaaggggtcattaaaaaatctgaattcgttagg
attatcactaggactctctactcgcttggatacggtaaagccggggctatgctcgaggaa
gaatcagggatccctctgcatcgttccttcgtggagacgtttcttcagcaggttaaggag
ggcaaatgggatgagagtgttgtcacgttgcacagaatcggtctgctggatgagaaggct
gtcaaatccgcgtccttcttgctactagagcagaagttcttagagcttttgagattcgaa
aagatagctgatgcgctaggcaccttgaggaacgagatcgagcctcttcgtattaatacg
aagcgtgttcatgagctcgcttcctcttttattatatcgccttccgcttcttcgggtcta
ggcaaagagaatgtgagttcaaggtccaaggttcttgaggaactgcagagcttgcttccc
gcttctgttataatcccggagaataggttggagactttagttgagaattcacttcacatt
cagcgggatgcttgtgttttccataatactttggatagtgatttgtctttgtactctgac
catcaatgcgggaagcaccaaatcccttctcagactgttcagatcttggagtcgcatact
gatgaggtttggttcttgcaattctcgcataatggcaaatatttagcttcatcttccaaa
gatcagaccgcaattatatgggagatcaacgcagatgggcacatgtcactgaagcataaa
ctcgttggccaccagaagcccgtgactgcggtcttatggagtcctgatgatcgtcaggtc
cttacatgtggagcagaagaggttatcagacggtgggatgttgattcaggagactgtgct
cacacgtatgagaaaggcggcggtatcggtcccatttcttgcggatggtatgctgatggg
aagggaatcatcgcagggatgacagaccgaagcatctgcatgtgggatttagacggtaga
gagatggaatgctggaaaggtcagaggacgcagaaggtatcggatatcgcgatgacggac
gatgggaagtggcttgtgagtgtgtgcaaggactccgtgatatctctgttcgatagggaa
gcgacgtttgagaggttgatcgaagaggaagacaccattacctcgttctcgctttccaac
gacaacaagtatgtgctggtgaatcttcagaaccaggagatccgtctctggagtatcgaa
ggtgatcccaagattgtgacgagatacaaaggccacaagcgctcgcggttcctcatcaga
tcgtgctttggtggctatgaacaaggtttcatcgctagtggaagcgaggattctcaggta
tacatatggcacagatcgacagggaagttaatcattgagttaccaggacatgcaggagcg
gttaactgtgtgagctggagcccaacgaaccttcacatgatggcttcagctagtgatgat
ggcaccataaggatatggggacttgaccggattaacccacataaccagaagaagcaagtg
caaggaagtagcagtaatggtgttgtgcttcgccaatgcaacgggaactga

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