Raphanus sativus (radish): 108817288
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Entry
108817288 CDS
T06014
Name
(RefSeq) proline--tRNA ligase, cytoplasmic
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108817288
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108817288
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108817288
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
108817288
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108817288
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108817288
Prokaryotic type
108817288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
108817288
NCBI-ProteinID:
XP_018445441
UniProt:
A0A6J0KD52
LinkDB
All DBs
Position
7:15491749..15494807
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AA seq
516 aa
AA seq
DB search
MAGASGKKEKVKVDKAGPSGGGNKKKDVKKETGLGLSVKKDENFGEWYSEVCKHEMIEYY
DISGCYILRPWSMAIWEIMQTFFDAEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEV
AWVTKSGKSDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPF
IRSREFLWQEGHTAFATKEEADEEVLQILELYRQIYEEYLAVPVVKGMKSENEKFAGGLY
TTSVEAFIPNTGRGVQGATSHCLGQNFSNMFEITYENEEGKREKVWQNSWAYSTRTIGVM
IMTHGDDKGLILPPKVASVQVVVIPVPYKDANTQGIFDACTATVSALSEAGIRAEEDLRD
NYSPGWKYSNWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDIPRGSLVEHVKELLEK
IQQNMYEVARQKREACVQEIRTWDEFISALNQKKLILAPWCDEEEVERDVKARTKGETGA
AKTLCSPFEQPELPEGTLCFASGKPAKKWTYWGRSY
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgcaagtggaaagaaagagaaggttaaggttgacaaggctggtcccagtggg
ggaggcaataagaagaaggacgtcaagaaggaaacaggtcttggactcagcgttaagaaa
gatgagaactttggggaatggtactctgaggtttgtaaacacgagatgattgagtactac
gatatctctgggtgttatatccttaggccatggtcgatggccatttgggagattatgcaa
actttctttgatgcggaaatcaagaaaatgaaggtcaagaactgctatttccctctcttt
gtatctcctggcgtcctggagaaggagaaggaccacatcgagggtttcgcccctgaggtt
gcttgggttacaaaatcgggcaaatctgacttagaagttccaattgctattcgtcctacc
agtgagactgtgatgtacccttactacagcaagtggataaggggccaccgtgacttgcca
ttgaagcttaaccagtggtgcaatgttgtaagatgggagttcagcaaccctacccctttt
atccggagccgtgaatttctgtggcaggaagggcacactgctttcgccacgaaagaagaa
gcagatgaagaggtccttcaaattttggagctttaccgtcagatatacgaagagtatctc
gcagtcccagttgtgaaaggtatgaagagtgaaaatgagaagtttgctggaggactttac
actacaagtgtagaggctttcattccaaacactggtcgtggtgtacaaggtgcaacctct
cattgtttgggacaaaacttttcaaacatgtttgagatcacgtatgagaatgaggaagga
aagagagaaaaagtgtggcagaattcttgggcctacagtaccagaacgattggagtaatg
attatgactcatggagatgacaaaggcctgatacttcctcctaaagtcgcatctgtgcaa
gtcgttgtgatccctgtgccctacaaagatgcgaatacccaaggaatctttgatgcttgt
actgctactgtatctgccttgagtgaagcaggtatccgtgctgaagaagatttaagggac
aactactctcctggatggaagtactcaaactgggaaatgaagggtgtcccattgagaatt
gagattggaccccgagatcttgaaaatgatcaggtcagaactgtgagacgggacaacgga
gttaaggaagatatcccaagaggtagcttagtcgagcatgttaaggaactgcttgagaag
atccagcagaacatgtatgaagtggcgaggcaaaagagggaagcatgtgtgcaagaaatt
aggacttgggatgagtttattagtgctctcaaccaaaagaaacttatcttagctccctgg
tgcgatgaagaggaagtggagagagatgtcaaggcacgtactaaaggtgaaactggagca
gctaaaactctctgttctccatttgaacagccagaactccctgaaggcactctctgcttt
gcatctggaaagcctgcaaagaagtggacctattggggcaggagttactaa
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