KEGG   Raphanus sativus (radish): 108817317
Entry
108817317         CDS       T06014                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108817317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108817317
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108817317
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like LRR_At5g56370 F-box LRR_NXF1-5 LRR_At1g61320_AtMIF1 Sulfolobus_pRN LRR_8
Other DBs
NCBI-GeneID: 108817317
NCBI-ProteinID: XP_018445475
UniProt: A0A6J0KBT7
LinkDB
Position
7:13808008..13810597
AA seq 362 aa
MVSQEGSATLNRCFEKMKEINMERIVFTGWKDIPAELLMRILNLVDDRTVIIASGVCSGW
RDAISFGLTRLSLSWCKKNANSLVLSLAPKLVNLQTLVLRQDSPQLEDNAVEAIANHCHE
LQDLDLSKSLKLTDHSLYALARGCTNLTKLNLSGCTSFSDTALAYLTRVCRKLKVLNLCG
CVEAVSDNALQAIGENCSQMQSLNLGWCENVSDDGVMSLSYGCPDLRTLDLCGCVLITDE
SVVALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKHDMRRSVKKGKFDEEGLRSLN
ISQCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQTHRTHTAYPHP
AH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggtgagccaagaagggtcggcaacacttaaccgatgcttcgagaagatgaaggagatc
aatatggaaagaattgtgttcactgggtggaaagatatccctgctgagcttctgatgagg
atcttaaaccttgttgatgatcggacggtcatcattgcttctggtgtttgcagtggctgg
agagatgctatttcctttggtctcactcgtctctccctctcttggtgcaagaagaacgcg
aacagtttggttctgtctcttgctccaaaactcgttaaccttcagactctggtactgaga
caggacagccctcagcttgaggacaacgcagtggaagctatagcgaatcactgtcacgag
ctacaagatcttgaccttagcaaaagcttgaaactcactgaccattccctctatgctctg
gctcgcggctgcactaacctcactaaactcaaccttagcggctgcacgtcattcagcgac
actgctttggcctatttgacaagggtttgccggaagctcaaagttctaaatctttgtggc
tgtgttgaagctgtatctgacaatgcattgcaggctattggagaaaactgcagtcagatg
caatcactaaacttgggatggtgtgagaatgtaagtgatgatggagtcatgagtttatct
tatggctgtcctgatctaagaacccttgatctttgtggatgtgttcttattacagatgag
agtgtggtggctttggcgaataagtgtgtacacttgaggtcattggggctatactattgc
aggaacataactgacagagcaatgtactcactggctcagagtggagtgaagaacaagcac
gatatgaggcggtcggttaagaaaggcaagttcgatgaagaaggactaagaagcctcaac
attagccaatgtacttaccttacaccttcagctgttcaagctgtctgcgatacattccct
gcgctccacacttgttccggcaggcattcgcttgtcatgagtggttgtctgaatttaaca
tcggttcactgtgcatgtatcctccagacccaccgcacccacacagcttaccctcacccg
gctcattga

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