Raphanus sativus (radish): 108817338
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Entry
108817338 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108817338
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108817338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108817338
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108817338
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
108817338
NCBI-ProteinID:
XP_018445499
UniProt:
A0A6J0KEN6
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Position
7:3543847..3546198
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AA seq
293 aa
AA seq
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MANLPPSFPFSMASSSNDRNLSPVEQLVLDICDPDLRENAIRELSKKREIFHDLAPLLWN
SFGTTCALLQEITSVYRLLTPPTLTVAQSNRVCNALALFQCVAAHPETKMQFLRAQMPMY
LYPFLKTSSTLTPYEYLRLTSLGVIGALVKADDREVISFLLKTEIIPLCLQSMEDGSELS
KTVAVFIVQKILLDGDGLIYMCVCADRFYALGQVLDNMVTSLAQAPSPRLLKHIVRCYLR
LTDNRRACLALRNCLPDLLSNAAFTSCLYDDPIATQWLQQLHHNIMVIPPPGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcttcctccttccttccctttctccatggcttcttctagcaacgatcgcaac
ctctctcccgtggagcagttggtgctcgacatctgtgaccctgacctcagagagaatgct
attcgcgagctgtccaagaaaagagagatctttcatgatttggctccgctgttgtggaac
tcttttggtaccacttgtgctcttcttcaggagatcacctcagtttaccgtctcctgact
cctccaaccttgactgttgctcagtccaacagggtctgcaatgcccttgccctttttcag
tgtgttgctgctcatcctgaaacgaaaatgcagttccttagagctcagatgcccatgtac
ctgtatcctttcttgaagacgtcaagcacgttgacaccctatgagtacctgcgtttgact
agcttgggtgttattggtgcactcgtcaaggctgatgatagagaagtgatcagtttcctt
ctcaaaactgaaatcatcccattgtgcctccagtcgatggaagatggcagcgagttgtca
aagactgttgctgtcttcattgttcagaaaattttgctggacggtgatgggcttatttac
atgtgcgtctgtgcggataggttctatgctttgggtcaagttttggataatatggtgact
tcacttgcacaagcaccttctcctaggcttctaaagcacatcgtacgctgttatcttcgc
ttgacagataacagaagggcctgccttgcactcagaaactgcctcccggatcttcttagc
aatgccgccttcaccagctgtctctatgatgatccaattgcaacgcagtggctgcagcaa
ctgcaccacaacatcatggttataccccctccagggctgtag
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