Raphanus sativus (radish): 108817352
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Entry
108817352 CDS
T06014
Name
(RefSeq) RING-H2 finger protein ATL11-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108817352
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108817352
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108817352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Rad50_zn_hook
NAF
FANCL_C
Tmpp129
Prok-RING_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108817352
NCBI-ProteinID:
XP_056846739
UniProt:
A0A9W3C5B3
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Position
7:complement(11928473..11930102)
Genome browser
AA seq
402 aa
AA seq
DB search
MNTLSKIILSRSIIGHHHHGSSVRLLLFLVLFSLQVSAETNNGSDMYGESSRFDPTMAIL
MIVLVSVFFALGFFSIYIRRFLERCMGSNNQHPLDVGGNWLSLSRPRARGLDASVVETFP
TFRYSTVKTLKIGKEALECPVCLNEFEDDETLRLIPKCCHVFHPGCVDAWLRSHATCPLC
RADLVPVPGESAVSVQIPGLADNAPGSDSTGNRTMVLSSPDARLINSVALTGNQSMRRSL
STGWNLAGLFTNSDSTGQHAENLDRFTLRLPQNIHSNLVNPNLSKSHVALPQVMSSARGY
RTGGLETDRNYFYYERFDDQDGQLDRRPFSITPPYRTCSINTSPCGSGDQVRAGTPKGLL
LAMKSPFDRLFLGKNNIGERSMNNNIGERSSDHLRSGDASPV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctaagtaaaatcatcctcagccgttcaatcattggtcatcatcatcatggt
tcaagtgtacggctacttctctttctcgtgctcttctcattgcaagtttcagctgaaact
aacaacggttcagatatgtatggagaaagctctcggttcgacccaaccatggcaatactc
atgatcgtcctggtcagcgtctttttcgctctcgggtttttctccatctatatccgtagg
tttcttgaacgatgcatgggcagcaacaaccaacaccccctcgatgtcggcggcaactgg
ctttccctgagccgtccacgggctcgtggactcgacgcgtcggtcgttgagacatttccg
acgttccgatactcaacggtgaagacgctcaagattggcaaagaagcccttgagtgtcct
gtttgcttaaacgagttcgaagacgatgaaacgctgcgtttgattcctaaatgttgccac
gtgttccatcctggttgtgtagacgcttggctacggtctcatgccacatgtcctctctgc
cgcgccgatctcgtccctgtaccgggtgaatctgctgtttctgtccagatacccggttta
gccgataatgctcccggttctgattcaaccggtaaccgcacgatggttttgagttctccg
gatgcgaggctaatcaactcggtggcgttgaccggtaaccagagtatgcgtaggtctctg
tctactggatggaatttagccggactattcaccaattctgactcgaccggtcaacatgca
gagaatcttgaccggttcacgctaaggttaccgcaaaacattcacagtaatctcgtgaac
ccaaacctttcaaaaagccacgtagcgttacctcaggtgatgagttcagcgagagggtac
agaaccggtggactagagactgatcgaaactatttctactatgaacggtttgatgaccaa
gatggccagttagaccgtagaccattctccataacacctccgtaccggacatgttcaatc
aatacgtctccatgtggcagtggtgaccaggtgcgtgccggtacacccaagggtttgctt
ctagcgatgaaatcaccgtttgatcggttgtttcttggaaagaacaacatcggtgaacgt
tcaatgaacaacaacatcggtgaacgttcgtcggatcaccttcgctccggcgatgctagc
cctgtgtag
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