Raphanus sativus (radish): 108817497
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Entry
108817497 CDS
T06014
Name
(RefSeq) ubiquitin-activating enzyme E1 2
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108817497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108817497
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108817497
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
108817497
Ubiquitin system [BR:
rsz04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
108817497
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108817497
Exosomal proteins of other body fluids (saliva and urine)
108817497
Exosomal proteins of colorectal cancer cells
108817497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_4HB
E1_FCCH
E1_UFD
DUF3197
Motif
Other DBs
NCBI-GeneID:
108817497
NCBI-ProteinID:
XP_018445710
UniProt:
A0A6J0KCI3
LinkDB
All DBs
Position
7:complement(5599483..5603943)
Genome browser
AA seq
1079 aa
AA seq
DB search
MEPFVARENPLASTSSPRKKRRMIDHTESVADGSPILTSISNIELNNAGDGDDDATPMSV
AEVGNNFNNHEIDEDLHSRQLAVYGRETMRRLFASNVLISGIQGLGVEIAKNIILAGVKS
VTLHDENVVELWDLSSNFVFSEEDVGKNRAIASVHKLQELNNAVAVSALTDKLNKEQLSG
FQAVVFVDSSFEKATEFDDFCHSHEPPIAFIKADVRGLFGSLFCDFGPQFTVLDVDGEEP
HSGIIASVSNENPAFVSCVDDERLELQDGDLVVFSEVEGMAELNDGKPRKVKNVKPYSFV
LEEDTTKCGTYVKGGIVTQVKQPKVLNFKPLREAIKDPGEFLLSDFSKFDRPPLLHLAFQ
ALDKFSSQAGRFPLAGSEEDAQKLVEIATDINESLGDARLEDVNSKLLRHLAFGSRAVLN
PMAAMFGGIVGQEVVKACSGKFHPIFQFFYFDSLESLPKEPLDASEFRPQNSRYDAQISV
FGSTLQQKLENATVFLVGAGALGCEFLKNLALMGVSCGVRGKLTVTDDDVIEKSNLSRQF
LFRDWNIGQAKSTVAATAAAGINSRLNVDGLQNRVGPETENVFDDSFWENLTVVVNALDN
VTARLYVDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSF
PHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPDEYMKAMRSAGDAQARDTLGRVVECLE
KEKCNSFQDCITWARLRFEDYFVNRVKQLIFTFPEDANTSTGAPFWSAPKRFPRPLQFSS
ADLSHTNFVMAAAILRAETFGIPTPEWAKTPTGLAEAVERVIVPNFEPREDAKIVTDEKA
TTLSTASVDDAAVIDELIAKLERCRLSLQPEFRMKPIQFEKDDDTNYHMDMIAGLANMRA
RNYSVPEVDKLKAKFIAGRIIPAIATSTAMATGFVCLELYKVLDGAHKVEDYRNTFANLA
LPLFSIAEPVPPKVVKHQDQSWTVWDRWVIKGNPTLKELLKWVKEKGLNAYSISVGSSLL
YNSMFPRHKERMDRRVVDIAREVAKVELPAYRRHLDVVVACEDDDDNDVDIPLVSVYYA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaaccattcgttgcaagggagaaccctctcgcatccacttcgtcgccgcgtaagaag
cgacggatgatcgatcacactgagtctgtagccgacggttcgccgatcctcacctctatc
tccaacatcgagctgaacaacgccggtgatggtgacgacgacgcgacgccgatgagcgtg
gcggaggttggtaacaacttcaacaatcacgagatcgatgaagatcttcacagcagacag
ctcgctgtgtacggacgcgagaccatgaggaggcttttcgcttccaacgtcctcatctca
gggatccagggccttggtgtcgagattgccaagaatatcattctcgctggtgtgaagtcg
gtgactcttcacgatgaaaatgtggttgagctatgggacttgtctagcaactttgttttc
tcggaggaggacgttggtaagaatagagcaattgcttctgttcacaagctgcaagaactc
aacaatgccgtcgctgtctcagctttgactgacaagttaaacaaagagcagctctctggt
ttccaggccgtggtatttgtggatagctcttttgagaaagcgacggagtttgacgatttt
tgtcatagccatgagcctcctattgcattcatcaaggctgacgttaggggcctgtttggg
tcattgttttgtgactttggacctcagtttactgttcttgatgttgatggagaggaacct
cactctggcatcatcgcttctgttagcaatgaaaatcctgcttttgtttcatgtgtcgat
gatgagaggctcgaattgcaggacggagatcttgtggttttctctgaagttgaggggatg
gcagagttaaatgatgggaaaccaaggaaggttaaaaatgtcaagccgtattcatttgtc
cttgaggaagataccactaaatgtgggacatatgtgaagggtgggatcgtgactcaggtt
aaacaaccaaaggtgctcaactttaagccgctcagggaagcaattaaagatccaggcgaa
tttcttctcagtgacttttcaaagtttgaccggccacctcttcttcacttagcattccag
gcacttgataagttttcgtctcaagcaggccggtttcctcttgctggttctgaagaagat
gctcagaaactagtggaaatcgcaactgacatcaacgagagtttgggtgatgcaaggttg
gaagatgtcaactctaaactattgcggcatttggcctttggatccagggctgttctgaat
cccatggctgcaatgtttggtggcattgttggacaagaggtcgtcaaggcatgctctggg
aaattccatcctatctttcagttcttttactttgattcgttggagtcactccccaaggaa
ccccttgatgcatcagagtttagaccacaaaatagccgttacgatgctcagatctctgta
tttggttctacacttcagcagaaactcgagaatgccacagtttttcttgtaggggctggt
gctcttggatgtgagttcttaaagaatttggctttgatgggtgtgtcatgtggcgttcga
gggaagctaactgtcaccgatgatgatgttattgagaagagcaacctgagtcgtcagttt
cttttccgagattggaacataggacaggctaaatccacagttgccgcaacagcagcagcg
ggaataaattctcgtctcaacgttgatggtctgcaaaatcgtgttggaccagagactgag
aatgtctttgacgacagcttctgggagaatttgacagttgttgtcaacgcactggataat
gtcactgcaaggctctatgtcgattcaaggtgtgtgtacttccagaagcctctcctcgag
tcaggaactctaggtgctaagtgcaacacacagatggttatccctcatctcactgagaac
tatggggcctcgagagacccaccagagaaacaagctccgatgtgcacggtgcactcattt
cctcacaacattgaccactgcttaacatgggctcgctctgagttcgagggtctgcttgag
aaaacgccagctgaagttaatgcatacctctcaaatcctgacgaatacatgaaagcgatg
aggagtgctggtgatgctcaagctagggatactttgggacgtgttgttgagtgcctcgag
aaagagaagtgcaattccttccaggattgcataacctgggctcgtctgaggtttgaagat
tacttcgtgaaccgtgtgaagcagttgattttcacattccccgaggatgctaataccagt
actggagcaccattctggtctgccccaaagagattccctcgtccgcttcagttctcctca
gctgacctgagccataccaattttgttatggctgctgccatcttgcgagcagagacattc
ggaatccctactcctgagtgggctaaaactccaaccggactagctgaggcggtggaaaga
gtgatagtccccaactttgagccgagggaagatgcaaagatagtgacagatgagaaggct
acaactctgtctacagcttcagtcgatgatgcagcagtaatcgatgaactaatcgcaaaa
ctagagcggtgcaggctgagcttgcagccggagttcaggatgaagccaattcagtttgaa
aaggatgacgataccaactaccacatggatatgatcgctgggctagccaacatgagagca
aggaactacagcgttccggaggtggacaagcttaaagccaagttcatcgccggaagaatc
atacctgccatcgcaacttcaacggctatggcaacgggttttgtttgcctcgagctgtac
aaggtcttagacggcgcacacaaagtggaagactacagaaacacattcgctaacttagcg
cttccactcttctccatagctgagccggttccacccaaagtagtgaagcaccaagaccaa
agctggacggtttgggaccgatgggtcatcaaaggaaacccaaccctaaaagagttgctg
aaatgggtaaaagagaaaggactaaacgcgtacagcatatctgtcggaagctctttactg
tacaacagtatgttcccaaggcataaagagaggatggacaggagagtggtggatattgca
agagaagtagctaaagttgagttgcctgcttacagacgtcacttggatgttgtggtggct
tgtgaggatgacgacgacaatgacgttgatatccctctcgtatcagtctactacgcctga
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