Raphanus sativus (radish): 108817498
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Entry
108817498 CDS
T06014
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108817498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108817498
03036 Chromosome and associated proteins [BR:
rsz03036
]
108817498
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
108817498
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
108817498
RSF complex
108817498
WICH complex
108817498
B-WICH complex
108817498
NORC complex
108817498
BRF complex
108817498
NuRF complex (fruit fly)
108817498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HDA2-3
DEAD
HAND
Myb_DNA-binding
DBINO
CHDII_SANT-like
PIN
Motif
Other DBs
NCBI-GeneID:
108817498
NCBI-ProteinID:
XP_018445726
UniProt:
A0A6J0KDX1
LinkDB
All DBs
Position
2:complement(18492670..18498866)
Genome browser
AA seq
1062 aa
AA seq
DB search
MARSSKSEVSSSSEEEVQVNDQVNVEEDDDEELQAVARSADSDEEAPASDDEVVPVEDED
GEGEEDNEKAEISKREKARLREMQKVKKQKIQGILDAQNASIDADINNKGKGGLKYLLQQ
TELFAHFAKSDPSASHKKGKGRGRHASKLTEKEEDEEYLKEEDGAIPGSGGTRLLTQPAC
IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMIV
TPKSTIGNWMNEIRRFCPVLRAVKFLGNPDERKYIRDELLVAGKFDVCVTSFEMAIKEKT
TLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFNTNFRLLITGTPLQNNLHELWALLNFLL
PEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG
MSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDH
LVTNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDE
RDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIG
QKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAE
MVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDNAELYDFDDDNKD
ENKFDFKKIVSENWNDPPKRERKRNYYEGEHVKQTLRPGAPSKPKEPKIPRMPQLHDFQF
FNLDRLTELYEKEVRHLMQIHQKTQMKDTVEADEPEEVGDPLTAEEVEEKEQLLEEGFST
WSKRDFNTFIRSCEKYGRDDIRSIASEMEGKTEEEVARYAQVFKERYKELNDYDRIIKNI
EKGEGRISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMVCMVHKLGY
GNWEELKTAFKTSPLFSFDWYVKSRSSQELARRCETLIRLIEKENQEYDERERRARKEKK
LAKNGTPSKRALGREAIESPTFLKKRKQLSMDDFVTSGKRRK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcttcgaagagcgaagtttcctcctcgtctgaggaagaggtgcaagttaac
gatcaggtcaatgtggaggaagatgatgatgaggagctccaggccgttgctcgctcggcg
gactccgacgaggaagcacccgcctctgacgacgaggttgtccctgtagaagatgaagac
ggcgagggagaagaagataatgaaaaagctgaaatcagcaaacgtgagaaggctagactt
agagaaatgcagaaggtgaagaagcagaaaattcagggtattttggacgcccaaaatgct
tccattgatgcagatattaacaacaaagggaagggaggattaaagtatcttctccaacaa
acggagttgtttgcacattttgctaaaagtgacccatctgcgtctcataagaaggggaaa
ggaaggggtcgtcatgcttccaaactaactgaaaaagaggaagatgaagagtatcttaag
gaagaagacggtgctattcctggatctggaggcacacgattgctcacacagcccgcttgt
attcaggggaaaatgagagactaccaattggctggtttaaactggctcattcggttgtat
gagaatggcataaatggaattcttgcagatgaaatgggtctggggaagacacttcaaaca
atttctttgctggcttacctgcatgaatacaggggaattaatggtcctcatatgatagtt
actccaaaatcaacaattggtaactggatgaatgaaattcgccgattttgccccgtcctg
cgtgctgtgaaattccttggtaatcctgatgaaaggaaatatattcgtgatgaactgctt
gttgcgggaaaatttgacgtttgtgttacaagctttgagatggctatcaaagagaagaca
accttgcgacgctttagctggcgttatataatcattgatgaagctcatcgaattaagaat
gagaattcacttctttcaaaaaccatgagactttttaacaccaattttcggcttcttatc
acaggaacccctcttcagaataatctccatgagttgtgggctcttctcaattttcttctg
cccgaggtttttagttcagcagagacttttgatgagtggtttcaaatttctggtgaaaat
gaccagcaagaagttgttcaacaacttcataaggttctccgaccatttcttcttcggagg
ttaaaatctgatgtagaaaaaggcttacctccaaaaaaggagacgatactcaaagttggc
atgtctcagatgcaaaaacagtactacaaggcgttactgcagaaggatcttgaagtggtc
aatggtggtggagaacgcaaacgtctgctgaacatagcaatgcaattgcgcaaatgctgc
aaccacccttatctcttccagggtgcagagccgggtcccccctataccacaggagatcac
cttgtaacaaatgcaggtaagatggttctcttagacaagttgctacctaagttgaaggaa
cgcgattcaagggttctgatattttctcagatgacgaggcttttggatattcttgaggat
tatttaatgtatcgtggttaccagtactgccgtattgatggaaatactggtggtgacgaa
cgagatgcttccattgaagcctacaacaagccaggaagtgagaagtttgttttcttgtta
tccactagagctggagggcttggtatcaatcttgctactgcagatgttgttatcctttat
gacagtgactggaatccgcaagttgacttgcaagctcaagatcgtgcacataggattggt
caaaagaaagaagttcaagtattccggttctgcacggagaatgctattgaggcaaaggtg
attgagagagcttacaagaagctggcacttgatgctctggtaattcagcaagggcgatta
gcagaacagaaaactgttaataaggatgagttactccaaatggttagatatggtgctgaa
atggtgtttagttctaaagatagcacaattacggatgaggatattgacagaatcattgcc
aaaggagaagaggcaactgctgaacttgatgcgaagatgaagaaattcactgaagatgca
atacagtttaaaatggatgacaatgctgagctttatgatttcgacgatgataataaggat
gagaacaagtttgattttaagaagattgtcagtgagaattggaatgatccaccaaagcga
gagagaaagcgcaactactatgaaggtgaacacgtcaagcaaacattgcgaccaggtgct
ccatccaaacctaaagaacctaaaattccacgcatgccccagttgcatgatttccagttc
tttaacctggacagactgaccgagctgtatgaaaaggaagtgcgacaccttatgcaaata
catcagaaaactcagatgaaagacacagttgaagctgatgaacctgaagaagttggagat
cccttaactgctgaagaagtggaagaaaaggagcaattgctggaagagggtttctcaaca
tggagcaaaagagattttaataccttcattagatcttgtgagaagtatggccgggacgat
ataagaagcattgcgtctgagatggaagggaaaacagaagaagaggttgcacgatatgcc
caagttttcaaagagcgatacaaggagctgaatgattacgatagaatcattaagaatata
gagaaaggagaaggaagaatctcgaggaaagatgaaatcatgaaagcaattgggaagaaa
ctggatcgctacaagaacccgtggctggaactgaagattcagtatggtcagaacaaaggg
aagctgtacaatgaagagtgtgaccgtttcatggtatgcatggtccataagcttgggtat
ggaaactgggaagaactaaagactgcttttaagacatccccattgttcagctttgactgg
tacgtaaaatcccgatcaagccaggaacttgccaggagatgcgaaacactgatcaggctg
atagagaaagagaaccaagagtatgatgagagggagaggcgagctcgtaaagagaagaag
cttgcaaagaatggaacgccttcaaagcgagctttgggtagggaagcaatagagagccct
acgttcttgaagaaacgaaagcagctgtcaatggatgattttgtaacctcgggaaaacgt
aggaaataa
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integrated database retrieval system
