Raphanus sativus (radish): 108817510
Help
Entry
108817510 CDS
T06014
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108817510
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108817510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
108817510
NCBI-ProteinID:
XP_018445731
UniProt:
A0A6J0KDX6
LinkDB
All DBs
Position
7:3271755..3276480
Genome browser
AA seq
1306 aa
AA seq
DB search
MKNLKLFSEVSQNIQLHSTEDEVVQFAAYDIDQSRFFFASSTNFVYTLHLSSFQNGRDCG
MPVEVCSIDLETGDFITAFDYLAEKESLLIGTSRGLLLVHEVESNVTELVGNIEGGVKCV
SPSPTGDLLGLISGFGQLLVMTYDWDLMYERSLPEGEADDVSVNCEGTSISWRGDGKYFA
TMGEVFESGCMSKKIKIWESDSGALQSSSEAKDFMKGILEWMPSGAKIAAVYKKKSDDGC
PSVAFFERNGLERSSFSIGEPGDAFESLKWNSASDLLAGVVSCKTHDAIRVWFFSNNHWY
LKHEIRYPREAGVMVMWDPTKPTQLICWTLAGQVTVCNFMWVTAVMEDSTAFVVDNSKIL
VTPLSLSLMPPPMYLFSLSFSSAIRDMAYYSRNSKSCLAVFLSDGSLSFVEFPARNTWED
LEGRDFNVEVSECKTALGSVTHLLWLDVHSLLCVSAYGSSQNKCLSSGSSEAELHGSYLQ
EVEVVCYEDHVPDQVTGSGFGASVTSQTPLESPVMALAWNPSKRDSAFVEFEGGKVLSYA
SRSGFMEARNDSVCFPSTCPWVRVAQVDAGGMQKPLICGLDDIGRLYINGKSLCNNCSSF
SFYSELDNEVVTHLIILTKQDFLFIVDTEDVLLQGEAALGNVYFVIDGRKRDEEVMSYVN
VWEKGAKVIGVLNGDEAAVVLQTMRGNLECIYPRKLVLSSITNALAQQRFKDALNLVRRH
RIDFNVIVDLYGWQAFLQSAVEFVEQVNNLNHVTEFVCAMKNEDVTETLYKKFSFSKKRD
KVSQGKELSGNKVSSVLQAIRKALEEHIPESPSRELCILTTLARSDPPAIEESLMRIKSV
REMELLNSSGDVSGKKSRPSAEEALKHLLWLLDSEAVFEAALGLYDLNLAAIVALNSQRD
PKEFLPYLQELERMSEPLMHFNIDLKLKRFDSALKNIVSAGDGYFPDCMNLMKKNPQLFP
LGLQLITDPEKKQAVLEAWGDHLTDEKRFEDAATTYLCCFNLEKASKAYRECGDWSGVLR
VGALMKLGKDEILKLAYELCEEVNALGKPGEAAKIALEYCGDISGGVNLLINAREWEEAL
RVAFLHTEDGLVSVVKSSALECVNGLVSEFKESIEKVGKYLTRYLAVRQRRLLLAAKLKS
EERSVIDLDDDTASEASSNLSGMSAYTLGTRRGSAASVTSSTATKARDLRRQRKSGKIRA
GSAGEEMALVDHLKGMRMTEGGKRELKSLLICLVTLGEKESAHKLQQTAENFLVAQVAAV
ELADDTVSSESVDEEVFSFERYVQKTRSTARGSDAFSWMLKVFVSP
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttgaagcttttctcggaggtttctcagaacatccaattgcattcgacggaa
gacgaagttgtacagttcgcagcttatgacatcgaccagagtcgcttcttcttcgcttct
tccactaacttcgtttacacccttcacctctcctcctttcaaaatgggagagattgtggg
atgccagtggaggtttgcagtattgatttggagacaggggatttcatcactgcctttgat
tatctcgcggagaaggagtctctcttgattgggacttctcgtgggcttctgcttgtgcat
gaggttgagagcaatgtgactgagctagttggaaatattgaaggaggtgtcaagtgtgta
tcgcctagtcctactggggatctacttggattgattagtggttttggtcagttgcttgtc
atgacttatgattgggatttgatgtatgagcggtcgcttcctgaaggtgaagcagacgat
gtgtctgtaaactgtgaaggaacttccatttcctggagaggtgatgggaagtattttgcg
accatgggtgaggtttttgaatccggttgtatgtctaagaagattaagatatgggagagt
gattccggcgctttgcagtcttcttcagaagcaaaagatttcatgaaggggattcttgaa
tggatgcctagtggggcgaaaatcgcagctgtttataaaaagaagtcagatgatggatgc
ccgtcagttgcattcttcgagaggaatggacttgagaggagctcatttagcataggagaa
cctggagatgcttttgaaagtctgaagtggaattctgcatctgatcttcttgcaggggtt
gttagttgcaaaacacatgatgctattagggtgtggttctttagcaacaaccactggtac
ctgaaacacgagattaggtatccaagggaagctggagtaatggtcatgtgggatccgaca
aagccaacgcagttaatatgttggactctggcagggcaagtgactgtttgtaattttatg
tgggtaacggcagtcatggaggactcaacagcctttgtcgtagataactccaagattctc
gtgacaccactgtctttgtccttgatgccacctcctatgtatttgttcagccttagtttt
tcttccgctatcagggatatggcatattactcgaggaactctaaaagttgtctggctgtg
tttttgtctgatggaagcctgtcttttgttgagtttcctgcacgtaatacttgggaagat
cttgaaggtagggacttcaatgtggaagtttcagagtgtaaaacagcgctgggctctgtt
acacatcttctatggctggatgtccattcacttctgtgcgtctctgcttatggttctagc
cagaacaagtgtctctcttctggttcgtctgaggcagagcttcatggctcttatttacag
gaagttgaagttgtctgttacgaggaccatgttcctgatcaagtaacaggctctggcttc
ggtgctagcgtcacttcccagacacctctggagtcacctgtcatggctcttgcctggaat
cctagtaagcgtgattcagcctttgtagagttcgaaggtgggaaagtgcttagctatgca
tcaagatcaggctttatggaagctcgtaatgatagtgtctgctttccatcaacttgtcct
tgggtgagggttgcgcaggttgacgccggtggcatgcagaaacccttgatatgtgggcta
gatgatattggtagactgtacatcaacgggaagagcctatgtaataactgcagcagcttc
tcattttattcagaactggacaatgaagttgtcacccatctgattattttgaccaaacag
gattttctctttatcgtcgacaccgaggatgtactactgcagggagaagcggcacttgga
aacgtctactttgtcatcgatggtagaaagcgagacgaggaagttatgagctacgtaaat
gtctgggaaaaaggtgccaaagtaataggagtcctcaatggagatgaagctgctgtagta
ctacaaactatgcgggggaatctggaatgcatttatcctagaaagctggtcctgtcttcc
attacgaacgcgttagctcagcaacggttcaaagatgcattgaacttggtaaggcgacat
agaatcgactttaatgttatcgttgatctatacggctggcaagcgtttctacaatcagct
gtagagtttgttgagcaagtgaacaatttgaaccacgttacagagtttgtttgtgccatg
aagaacgaagatgttacagagacactttacaagaagttctctttctccaagaagagggac
aaggtttcccaagggaaggagctatccggtaacaaagtatcatcagttctacaggcaatt
agaaaagcccttgaagagcatataccagagagtccgtcaagggaactctgtattctgacc
actcttgcccgaagtgatccaccagctattgaggaatctcttatgaggataaaatctgtt
cgtgagatggagttgctaaactcctctggtgatgtctcagggaaaaagtctcgtccatct
gcagaagaagccttgaaacaccttctgtggctactggattcagaggctgtcttcgaagct
gccttgggtctttatgatctgaaccttgcagctatcgtggcgctcaattcccaacgtgat
cctaaagagtttctaccttatcttcaggagctggagagaatgtccgaacccctgatgcat
ttcaacattgaccttaaactgaagcgctttgatagtgctctcaagaacatcgtgtcagca
ggggatggctactttcctgattgcatgaacttgatgaagaaaaaccctcagcttttcccg
ctaggtcttcagctaattaccgatcctgaaaagaaacaagcagtgctggaggcgtgggga
gatcatctcactgatgaaaaacgttttgaagatgctgctactacgtacctatgttgcttt
aaccttgaaaaggcttcaaaggcgtatcgtgagtgcggtgattggagtggggtactcaga
gtgggggcgctaatgaagttgggtaaagatgagatcttgaaattggcgtacgagctctgt
gaagaggtcaatgctcttgggaagccaggggaagcagcgaagatagctttggagtattgt
ggagatataagcggtggagtgaacttgctcatcaacgccagggagtgggaagaagcttta
agggttgcctttctgcatacagaagatggtttagtctcagtggtgaagagttctgctctt
gagtgtgttaatggtctagtaagcgaattcaaagaatcgatagagaaagtaggaaaatat
ctgactaggtatctagctgttcgtcagagacgattgctgcttgcagcgaagctcaagtct
gaggaacggtcagtcattgatcttgacgatgacactgcttcagaagcaagtagcaacctg
agtggaatgagcgcctatactttggggacaaggagaggttctgctgcttcagtcacctca
agcacggctaccaaggcaagagacttgaggcgccagagaaagagcgggaagatccgtgct
ggcagtgcgggtgaggagatggctctcgttgatcatttgaagggtatgcgtatgacagaa
ggaggaaagagagagctgaagtctttattgatatgtctggtaacacttggtgagaaggag
tctgcacacaagttgcaacagactgcagagaatttcctggtcgctcaagtagcagcagta
gagctagcagacgatacggtgtccagcgagagcgttgatgaagaagtgttttcctttgaa
cgttacgttcagaagacgagatccacggcacgaggctctgatgcctttagctggatgcta
aaggtgttcgttagcccatga
DBGET
integrated database retrieval system
