KEGG   Raphanus sativus (radish): 108817541
Entry
108817541         CDS       T06014                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108817541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108817541
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rsz02044]
    108817541
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108817541
Secretion system [BR:rsz02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108817541
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40 TPR_Sec16 WDR55 Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_EML EIF3I Beta-prop_DCAF4 MIOS_WD40 SRA1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 108817541
NCBI-ProteinID: XP_018445761
UniProt: A0A6J0KE08
LinkDB
Position
7:15221714..15228114
AA seq 1105 aa
MACIKGVDRSASVALAPDAPYMAAGTMAGAVDLSFSSSASLEIFKLDFQSDDRDLPLVGE
IPCSERFHRLAWGRNGSGSDEFSLGLIAGGLGDGNIDLWNPLSLTSPQSGVNALVGHLSV
HKGAVRGLEFNAITPNLLASGADDGEICIWDLAKPSEPTHFPLLKGSGSSTQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPLINFADSVRRRCSVLQWNPDIATQIMVASDDDS
SPTLKLWDMRNTMSPVREFTGHQKGVIAMEWCPSDSSYVLTCAKDNRTICWDTNTGEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKLGIYNIEGCSRYGADENTFGTANLRAPKWY
KRPVGASFGFGGKLVSFQAKAPPKGASCIPSEVFLHSLVTEQSLVSRTSEFEAAIENGDK
TSLRDLCEKKSEETESKEEKETWGLLKMMFDEEGTTRTKLISHLGFTLPSVEMDHAVNGL
SSDLNGTELEDTAVHAREPEESNEAAAFAMDNGEDFFDNFSKPDTPVSTSATEFMPPDTG
FTAKEEETQEMPEEEDESFDRVFDDAIQRALVVGDYKEAVDQCISANKMADALVIAHVGG
TSLWESTREKYLKMSSAPFMKVVSAMVNNDLTSLVHTRSHKYWKETLALLCTFAQGEQWT
SLCDVLASKLMAAGNTLAAVLCYICAGNVDRTVEIWSRSLANERDGRSYAELLQDLMEKT
LVLALATGNKTFSASLCKLFESYAEILASQGLLSTAMKYLKVLDSGGLSPELSILRDRIS
LSAEPETSTVASGNTQLQSTMPYHQEPTQAQPNVLSNPYDNQYQQPYTNSYGGGYAPTAV
NPPMQQATMFMPHQVQPAPQPSYPPAPASNAQPSMRSTFVPSTLPALKNANQYQQPTIGS
HSFTGPSNNAYPVPPGPGSYVPSGPSQAGQYSNPMMPQVVAPGAGPIGFTPMSTPGVAPR
SGTGSVQPPSPPTQQPAPAPAAPPPTVQTADTSNVPAHQKPLIATLTRLFNETSEAVGGA
RANPPKKREIEDNSKKLGALFVRLNSGEMAKSAAEKLGQLCQALDNHDFSTALQIQVLLT
NSDWDECNFWLSALKRMIKTRQNVR
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtggacagatccgcctccgtcgcgctagctcccgacgctcct
tacatggcggcaggaaccatggcgggagccgtggatctgtcattcagctcttcggcaagt
ctcgagatcttcaagctcgatttccagtcagacgatcgcgatttgcctttggttggggaa
atcccctgctcggagcgattccacaggctcgcgtggggaagaaacggatctggatccgat
gagttctccctcggtcttattgccggcggccttggcgatgggaacatagatctgtggaat
ccgctttctctaaccagtccacagtccggtgtaaatgcactcgttggacatctttcagtt
cacaaaggcgcggttcgtggtcttgagtttaatgctatcaccccaaatctacttgcctct
ggagctgatgatggtgaaatttgcatttgggatcttgctaagccttctgagcctactcat
tttccccttctcaagggaagtggttcttccactcaaggtgaaatctcttttatatcgtgg
aatagaaaagttcaacagatcttagcatctacctcatacaatggaactactgtaatatgg
gacttgaggaagcagaagcctttaattaactttgcagattccgttagacgccggtgctct
gttttgcaatggaaccctgacattgctactcagataatggttgcatcagatgacgacagt
tcacctactctgaagctctgggatatgaggaatacaatgtcacctgtgcgcgagtttacc
ggacaccaaaaaggtgtgattgcaatggagtggtgtccaagtgatagctcatatgttctt
acctgtgctaaggacaaccgtactatttgttgggacactaatacaggagagattgtggct
gagctacctgctggcaacaattggaactttgatgttcattggtacccaaagatacctgga
gttatatcagcatcttcatttgatgggaaacttggcatctacaacatcgagggttgcagt
cgctatggtgctgatgagaatacttttggtactgctaatttaagagcaccgaaatggtat
aagcgtccggttggtgcatcttttggatttgggggaaaactagtatcgtttcaggcaaag
gcccctccgaagggtgcctcatgcattccgtctgaggtttttttgcacagcctggtaaca
gaacagagtttagtgagtcgtacttctgaatttgaagccgccatagaaaatggagataag
acttctctaagggatttgtgtgagaagaaatctgaagagactgaatccaaagaagagaaa
gagacatggggcttgctgaaaatgatgtttgatgaggaaggaactacaaggacaaagttg
atcagccatcttggctttactttaccttctgtagaaatggatcatgctgtaaatgggctc
tcttcagatcttaatggcactgaattagaggatactgcagtgcatgcacgggagcctgag
gaaagtaacgaggcagctgcatttgctatggacaatggagaagacttctttgacaacttt
tctaaaccggatacacccgtatctacctctgccacagagtttatgcctcctgacacaggt
tttactgccaaagaagaagaaactcaagaaatgccagaagaagaagatgaaagttttgac
cgtgtatttgatgatgccatccaacgtgctttggttgttggagattacaaggaagcggtg
gatcagtgtatatctgcaaataagatggctgatgctttagttattgctcatgttggtggt
acatcgttatgggagagtactcgtgagaaatatttgaagatgagtagtgcacctttcatg
aaggttgtttctgcaatggtgaacaacgatctcaccagccttgtccatacaaggtcacac
aagtactggaaagaaacccttgctctcctatgtacttttgcacaaggagaacagtggacc
agcctgtgtgatgtccttgcctcaaagttgatggctgctggtaacactttggctgcagtt
ctgtgctacatttgcgcaggcaatgttgacagaacagtagaaatttggtcgagaagcctt
gcgaacgagcgtgatggaagatcttatgcagagcttcttcaggatcttatggagaagact
cttgtccttgctttagcaactggcaacaaaacgttcagtgcatctctgtgtaaactcttt
gagagttatgcggagatattggccagccaagggcttctttcaacggcaatgaagtactta
aaagttctggattctggtggcttgtcacctgaactctctatattacgtgatcgcatttct
ctttctgcagaacctgagactagcactgtagcttcaggcaacactcagcttcaaagcacc
atgccatatcaccaggagccaactcaggcgcaaccaaatgttctaagtaacccatatgat
aatcagtatcaacaaccatacactaattcttatggtggaggatatgcccccacagctgta
aatccacctatgcagcaagcaaccatgtttatgcctcaccaagttcagccagcaccgcag
ccatcttatcctccggctcctgcaagcaatgctcagccctccatgagatctacttttgtt
ccttcaactctccctgcactgaagaatgcaaaccagtatcagcagccaaccattggttcc
cattcattcaccggaccatctaacaatgcataccctgttccccctggccctggttcatat
gtaccttctggcccttcacaagctgggcaatattctaatcccatgatgccccaagtcgtt
gctccaggagctggacccataggatttacgcctatgtcaactccaggagttgctccaaga
tctggaacaggttctgtgcaaccaccaagtcctccaacacagcagccagcacctgcgcct
gcagctccgccaccaactgttcagactgcagatacttccaacgtcccagcgcaccagaaa
cctttgatagcaacgttgacaaggcttttcaatgagacatcggaagcagtgggaggtgca
cgtgcaaatcctcctaagaagcgtgagatagaagacaactcaaaaaaattaggggctttg
tttgtgagacttaacagcggagaaatggccaagagtgccgcagaaaaactcggacagctc
tgccaagctctggacaaccatgacttcagtacggcccttcagatacaggtacttctgacg
aacagcgattgggatgagtgcaacttctggctgtcggcattaaagcggatgatcaagacc
aggcaaaatgtgcgatga

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