Raphanus sativus (radish): 108817608
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Entry
108817608 CDS
T06014
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108817608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108817608
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108817608
03012 Translation factors [BR:
rsz03012
]
108817608
04131 Membrane trafficking [BR:
rsz04131
]
108817608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108817608
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108817608
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108817608
Translation factors [BR:
rsz03012
]
Eukaryotic type
Elongation factors
108817608
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108817608
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108817608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
108817608
NCBI-ProteinID:
XP_056846529
UniProt:
A0A6J0M496
LinkDB
All DBs
Position
7:complement(7463308..7465628)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGLLKPGMVVTFAPSGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtttcacatcaacatcgtggtcatcggccatgtcgactctggaaaa
tcgaccaccaccggtcacttgatctacaagctcggtggtatcgacaagcgtgtcatcgag
aggttcgagaaggaagctgctgagatgaacaagaggtctttcaagtacgcgtgggtgttg
gacaaacttaaggccgagcgtgagcgtggtatcaccattgacattgctctctggaagttc
gagaccaccaagtactactgcacggtcattgatgctcctggacatcgtgatttcatcaag
aacatgattactggtacctcccaggctgattgtgctgtcctcatcattgactccaccact
ggtggtttcgaggctggtatctccaaggatggtcagacccgtgagcatgctcttcttgct
ttcacccttggtgtcaagcaaatgatttgctgttgtaacaagatggatgctactacccct
aagtactccaaggctaggtacgatgaaatcatcaaggaggtgtcttcctacttgaagaag
gttgggtacaaccctgacaaaatcccattcgtccccatctctggattcgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggaccaactctcctcgaggctctt
gaccagatcaacgagcccaagagaccctctgacaagcccctccgtctcccacttcaggat
gtctacaagatcggtggtattggaacggtgccagtgggacgtgtcgagactggtctgctc
aagcccggtatggttgtcaccttcgctccttcagggttgaccactgaggttaagtccgtt
gagatgcaccacgagtctcttgtggaggcacttccaggtgacaacgttggattcaatgtt
aagaatgttgctgtcaaggatctcaagcgtgggtatgttgcatccaactccaaggatgac
cctgctaagggagctgccaacttcacatcccaggtcatcatcatgaaccaccctggtcag
atcggtaacggatacgccccagttctcgattgccacacgtcccacattgcagtcaagttc
tctgagatcttgaccaagattgacaggcgatctggtaaggagatcgagaaggagcccaag
tttttgaagaatggtgatgctggtatggttaagatgactccgaccaagcccatggttgtc
gagactttctctgagtacccaccgttgggacgtttcgctgttagggacatgaggcagacc
gttgctgttggtgtcatcaagagtgttgacaagaaggacccaaccggtgccaaggtcacc
aaggccgcagtgaagaagggagccaaatga
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