Raphanus sativus (radish): 108817733
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Entry
108817733 CDS
T06014
Name
(RefSeq) two-component response regulator ARR11
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108817733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108817733
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108817733
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108817733
NCBI-ProteinID:
XP_018446001
UniProt:
A0A6J0KER8
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Position
7:9057266..9059353
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AA seq
521 aa
AA seq
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MDKGFSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVI
SDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETKRVMKGVQHGACDYLLKPIRMKELKI
IWQHVLRKKLQEVKDIEGCYDGGANWFTGNDETHYLGGGEDVSFGKKRKEFDFEKKLLLQ
DESDPSSSSSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVA
SHLQKYRLYLSRLEKGKELKCYSGGVKNMDSPPKDSEFTSRHQSPGKNNSYAFSGGSYKA
ESDPKQLAASSVSDPSSDVHTPPPKAKKTRIEFDPPISSSCAFDSLLPWEDVPDPLESKH
QILYQSSFLQQQPLLPSQTPFVMEKEMKPSYETCVNADEFLMPQDENSTVILQDLHLCAP
PSAMKLQESSSNVTNDTESILRSLNWELPESNHSGFIDTDLDFSWLHNEHFLANTSGNFQ
NFQFQDYSCSPSLPSELPPHLWFGNDPDEYTLMVDHGLFIS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggataaaggcttctctcccgtcggtctaagagttcttgtggttgatgacgacccaaca
tggctcaagattcttgagaaaatgctaaagaagtgctcttacgaagtcactacatgtggg
ttagctagagaagctctgaggctgctgcgggagcgtaaggacggatatgatatcgtgatc
agcgacgtcaacatgcctgacatggacggcttcaagctccttgagcacgttggccttgag
ttggacctccctgtcataatgatgtcagtggacggtgagacgaaaagagtgatgaaaggt
gtgcagcacggagcgtgtgattacctgttgaagccgataaggatgaaggagctgaagatc
atatggcagcatgttctgagaaagaagcttcaagaagtgaaagacatcgaaggctgctat
gatggaggagctaattggttcaccggaaacgatgagacgcattatcttggaggaggtgaa
gatgtttcttttgggaaaaagaggaaagagtttgactttgagaagaagcttcttcttcag
gatgagagtgacccatcatcatcatcatcttcctccaagaaagccagagttgtttggtct
tttgagcttcatcagaagtttgtcaacgctgttaaccagatcggttgcgatcacaaagct
ggtccaaagaagatattggacctcatgaatgttccatggctcactagggaaaacgttgct
agccacctccagaagtacaggctttacctgagcagattggagaaaggaaaggagctaaag
tgttattctggtggagtaaagaatatggattcacctccaaaagattccgaatttacttca
cgccaccaaagccctggcaagaacaacagctatgcattctctggaggcagttataaagca
gagagtgatccaaagcaacttgctgcatcttcagtgtctgaccccagcagtgatgttcat
acgcctcctccaaaagcgaaaaagacgcgtatagaatttgatcctcccatttcttcaagt
tgtgcgtttgactctctccttccctgggaagatgttccagacccacttgaatcaaagcac
cagattctgtatcagagcagctttctccagcaacaaccattgttaccaagtcaaactccc
tttgtcatggaaaaggaaatgaagccttcttatgagacttgtgtgaatgcggatgagttt
ctcatgccacaagatgagaactctactgtgatccttcaagatctacacttgtgtgctcct
ccctctgccatgaagctgcaggagtcaagctcaaatgtaaccaacgatacagagtcgatt
ctgagaagcttgaactgggaacttccagaatcaaatcattctggttttatagacactgac
ttagacttcagttggcttcacaacgagcattttcttgcaaacacctccgggaacttccaa
aacttccagtttcaagattacagttgtagcccatctctcccatccgagctcccacctcac
ctttggtttggaaatgaccctgacgagtataccctcatggtagaccatggtttattcata
tcttga
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