Raphanus sativus (radish): 108817770
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Entry
108817770 CDS
T06014
Name
(RefSeq) conserved oligomeric Golgi complex subunit 5
KO
K20292
conserved oligomeric Golgi complex subunit 5
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817770
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
108817770
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Gene cluster
GFIT
Motif
Pfam:
COG5_C
COG5_N
VPS51_Exo84_N
EXOC6_Sec15_N
Dor1
Baculo_PEP_C
MscS_porin
Sec8_N
MPH2
DUF6551
Gp58
COG6_N
Vps53_N
NIT
Motif
Other DBs
NCBI-GeneID:
108817770
NCBI-ProteinID:
XP_018446060
UniProt:
A0A6J0KDQ6
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Position
7:8911301..8915088
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AA seq
827 aa
AA seq
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MMALPPPSPSSSPSLQRLSTFKNPPPSGPSPSSNSSSPLDSFANDPILAPFLSPSFSSST
FSSAALASGSPASTAERLHQAIRLLDAQLRTDVVSRHPELLSQLSSLSHAETSLSSLRSS
VSSLQSSIRRVRSDLSEPVRSIRSKSTQLTNLHSASELLSHSVRALRLSKKLRDLTDGSD
PEKIDLAKSAQLHFEISAMCREYDLFGIEAIDEEIKFVDQIGEKLRSEAMKVLERGVEGM
NQAEVGTGLQVFYNLGELKQTVDQLVNKYKGMAVKSVGVAMDMKAISSGGPGGGGGFGPG
GIRSSGAPHIGGGGKVRDALWQRMGSCMDQLYAIVVAVWHLQRVLSKKRDPFTHVLLLDE
VIKEGDSMLTDRVWDALVKAFTSQMKSAFTASSFVKEIFTMGYPKLVSMIENLLERIARD
TDVKGVLPAVDSERKEQMVSCIAIFQTAFLSLCFGRLSDLVNSIFPMSSRGSLPSKEQIS
QVLSHIQDEIEAVHPDGRLTLLVLREIGKALSNLAQRAECQISTGPETRQITGPATSTQI
RNFTLCQHLQGIHTHISSMVADLPSIAADVLSPHLGAIYAAACEPVTPLFKAMRDQLESC
ILQIHDQNFGVDDAALDSNTSPYMEELQKSILHFRREFLSRLLPSAASANTAGTESICTR
LARQMASRVLIFYIRHASLVRPLSEWGKLRMARDMAELELAVGQNLFPVEQLGAPYRALR
AFRPLVFLETSEMGSSPLIQDLPPSIVLHHLYTRGPDELESPMQKNRLSPKQYSLWLDNQ
KEDQIWKGIKATLDDYAVKIKSRGDKEFSPVYPLMLQIGSSLTEGNL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacttccacctccttctccgtcatcctcaccttctcttcaacgtctctccacc
ttcaaaaacccacctccttccggaccctcaccgtcttccaactcatcttctccactagac
tccttcgccaacgaccccatcctcgccccattcctctccccatccttctcctcctccacc
ttctcctccgccgcactcgcctccggctcccccgcctccaccgccgagcgtctccaccaa
gccatccgcctcctcgacgcccagctccgcaccgacgtcgtctcccgccaccccgagctc
ctctcccagctctcctccctctcccacgccgagacctctctctcctccctccgctcctcc
gtctcctccctccaatcctccatccgccgcgtcagatccgacctctccgagcccgtccgc
tcgatccgctccaaatccacccagctcaccaacctccactccgcctccgagctcctctcc
cactccgtccgcgcgctccgcctctccaagaagctccgcgatctaacggacggatcggat
ccggagaagatcgatctcgcgaaatccgcgcagctccatttcgagatctcagcgatgtgc
agagagtacgatctcttcgggatcgaggccatcgacgaggagatcaagttcgtcgaccag
atcggggagaagctgagatctgaagccatgaaggtgttggagagaggcgtggaagggatg
aatcaagccgaggttgggactgggttgcaggttttctataacctcggggagctgaagcag
acggtggatcagttggtgaacaagtacaaggggatggctgtgaagagcgttggggttgct
atggatatgaaagcgatttcttctggtgggcctggtggtggtggtgggtttgggcctgga
gggattaggtctagcggagcgccgcatatcggtggtggaggtaaggttagggatgcactt
tggcagaggatggggagttgtatggatcagttgtatgctattgtggttgctgtgtggcat
ttgcagcgtgtgttgtccaagaagagggatccttttactcatgttcttcttcttgatgaa
gtcatcaaggaaggtgattctatgctaacagacagagtctgggacgcacttgtgaaggcg
tttaccagccaaatgaagtctgcattcacagcttcgagttttgtgaaagaaatattcacc
atgggatatccaaagctggtgtctatgatagaaaatctccttgagaggatcgctcgcgac
accgatgtgaaaggagtgttacctgcggttgattcagaaaggaaagaacaaatggtttcg
tgcattgcaatattccaaactgctttcttatcactatgctttggacggttgtcagatctt
gtgaactctatattccctatgtcgagccgtgggagcttaccttccaaagaacagatctca
caggtactgtcacacattcaagacgagattgaggctgttcatccagatggtcgtttgact
cttctagttttgcgtgagataggcaaggctcttagtaaccttgctcaacgagctgagtgc
cagatttctacagggcctgagacacgccagataacaggtcctgcaacttcaacacagatc
aggaatttcacattatgtcagcatctgcaaggaatccacacgcatatctcatccatggta
gcggaccttcccagtatcgccgctgatgtattatctcctcatctgggtgcgatatacgct
gcggcgtgcgagccagttacacctttgtttaaagcgatgcgagaccagctggagtcatgc
attcttcagatccacgaccaaaactttggtgttgacgatgctgccttggacagtaacacc
tccccatacatggaggagttgcagaaatcgattcttcacttccgtagggagttcctatcc
aggctgttgccttccgcagcaagtgctaacactgcagggacagaatcaatctgcactaga
ctcgcgagacaaatggcttcaagggttttgatcttctacataaggcatgcttccctggtg
cgaccactatcagaatgggggaaactcaggatggctagagacatggcagagctggaactc
gcggtgggacagaatctgttccctgtggagcagctcggtgcaccgtacagagctcttaga
gcatttaggccattggttttcctggaaacatctgaaatgggatcatctcctctcatccag
gatctaccaccgagcatcgtcctacatcatctctacacgagaggcccagacgagttagag
tcaccgatgcagaagaacagactgagtccaaagcagtactcactgtggcttgataaccaa
aaagaggatcagatctggaaggggataaaagcgactttggatgattatgcagtgaagatc
aagtcgagaggggacaaggagtttagtccagtgtatccactaatgcttcaaattggttct
tctttgacagaaggaaacttataa
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