Raphanus sativus (radish): 108817780
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Entry
108817780 CDS
T06014
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108817780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108817780
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108817780
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108817780
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108817780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank_5
Ank
Ank_4
BAR
PH
Ank_3
ANK_LRRK2
BAR_2
PH_11
PH_20
PH_8
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
108817780
NCBI-ProteinID:
XP_018446073
UniProt:
A0A6J0KEQ3
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All DBs
Position
7:3383274..3388978
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AA seq
826 aa
AA seq
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MHFTKLDDSPMFRKQLQSMEESAEILRERSLKFYKGCRKYTEGLGEAYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHILNDRLLQFANMDLHEVKE
ARKRFDKASLTYDQAREKFLSLRKGTKSDVAAALEQELHSSRSMFEQARFNLVTTLSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNEK
MQEYKRQVDRESRYGSNSANGSPNGDGIQAIGRSSHKMIDAVMQSAARGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGSGSQLSGQRNSSELGSGLLSRWLSS
NNHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAESALDQMDWI
EKITGVIASLLSSQVPGSPMESGHHRSASESSSYESSEYDHPTSDEFVCERSFMGYNERP
SRSFQPQRSIRKGEKPIDVLRKVFGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLG
VHISKVRSLTLDVKVWEPSVITLFQALGNNFANTVWEELLHSRSAFHVDPGLTGSDKSRV
LVTGKPSYADMISVKEKYIQAKYAEKLFVRRSRDCDFPQSVAQQMWDAVSANDKKSVYRF
IVNGEADVNSVYDQPSSSSSSLTLSRVMLIPERPPTREEVLLRLRNELLDRTSSGCSSNV
PPEETGGCSLLHCACEKADIGMVELLLQYGANVNATDSSGQTPLHYCILRGKAVVARLLL
TRGADPEAVNGEGKTALDTAAESKFTDAEVLSLLSEAANGYNHRQC
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccaagcttgatgactctcccatgttccgcaaacagttgcaaagcatggag
gagagtgcagaaatattgcgggaaagaagtctcaagttttacaaaggatgccggaaatac
actgaagggttgggcgaggcttatgatggagacattgctttcgccagtgcacttgaaaca
tttggtggtggccataatgatccaattagtgtggcttttggaggacctgtaatgacgaaa
tttacaattgctttaagggaaattgggacgtataaagaagttcttcggtcacaggtggaa
cacatattgaacgacagattgcttcaatttgccaatatggacttgcatgaggttaaggaa
gctcggaagcgctttgacaaggctagccttacttatgatcaggcccgtgagaagtttcta
tcgttgaggaaaggtactaaaagtgacgttgctgctgctttagaacaggaacttcactct
tcgaggtctatgtttgagcaagctcgattcaaccttgtgactaccctctctaatgttgaa
gctaagaaaagatttgaatttttggaagcagtcagcggaactatggatgcacatcttcgc
tacttcaaacagggttacgaattactacatcagatggaaccatatatcaatcaggtgttg
acctatgcacaacagtccagagagagatcaaattatgaacaagcagcacttaacgagaag
atgcaggagtacaaaagacaggttgatcgagagagcaggtatggttcaaacagtgctaat
ggatccccaaatggagatggtatacaagcgattggtagaagctctcacaaaatgatagat
gccgtaatgcaatctgcagcaaggggaaaggtgcaaacaatacggcaaggttatctctct
aaacgctcttcaaacttgagaggagactggaaaagacggttttttgttcttgacagccga
ggaatgctgtattattaccggaaacaatgtagcaaaccatctgggtctgggagccagctt
tctggacagaggaatagctccgagcttggttctggacttctcagtaggtggctttcttcg
aataatcatggtggtgtacatgatgagaagtctgtagctcgtcatacagtgaacttgctt
acctcaacgattaaagtcgacgctgatcagtcagacctgaggttttgctttaggatcatt
tcaccttcaaaaaactacacattgcaggctgagagtgcactcgatcaaatggattggata
gaaaagatcactggggtgattgcatcactacttagttctcaggtccctggtagtcccatg
gaaagtggtcaccatcggtctgctagtgaaagcagctcatatgaaagttctgagtatgat
catcctactagtgatgaatttgtatgtgagaggagctttatggggtacaatgaaaggcca
tctagaagtttccagccgcaacggtccattagaaagggtgagaagcccattgatgtcctg
agaaaagtctttgggaatgacaaatgtgcggattgtggagctcctgaaccagactgggct
tctttaaacctaggtgttcttgtctgtattgagtgttctggtgttcaccgcaaccttggt
gtgcacatatcgaaggttaggtcactcactctagacgtgaaagtatgggagccatctgtg
ataactttgttccaagctcttggaaacaattttgcgaacacagtctgggaggagctgctt
cattcaaggagcgccttccatgttgatccaggcttaacagggtctgataaatcaagagtg
cttgtcactggaaaacctagttatgctgatatgatatctgtcaaggagaagtatatacaa
gctaagtatgctgagaagctatttgttcggagatcaagagactgcgatttcccacaatca
gttgcacaacaaatgtgggatgctgtgtctgccaatgataaaaagtctgtttacaggttt
attgtcaacggtgaagctgatgtgaactctgtgtatgaccaaccatcatcttccagctct
tcgttgacactttccagagtgatgttaataccagagaggccaccaacgcgtgaggaagtg
ctactcagattaagaaacgagttgctcgatagaacttcctcaggttgctcttcaaatgtt
ccaccagaggaaactgggggttgctctctgctccactgtgcttgcgagaaggcagacatt
gggatggtggagcttttgctgcagtatggtgcaaatgtaaacgctacagattcaagtggt
caaacgccgctccactactgtattctcagaggcaaagcggtagttgcaagactgctactc
acgaggggagctgacccagaagccgtcaatggagaaggaaaaaccgctcttgacactgct
gcagagtcgaaatttactgatgctgaagtcctatctctcctttcagaagctgcaaatggt
tacaatcacagacaatgctga
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