Raphanus sativus (radish): 108817799
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Entry
108817799 CDS
T06014
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz03015
mRNA surveillance pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108817799
09122 Translation
03013 Nucleocytoplasmic transport
108817799
03015 mRNA surveillance pathway
108817799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108817799
03041 Spliceosome [BR:
rsz03041
]
108817799
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108817799
TREX complex
108817799
Spliceosome [BR:
rsz03041
]
Complex C
Other components
EJC/TREX
108817799
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108817799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
108817799
NCBI-ProteinID:
XP_018446099
UniProt:
A0A6J0KGE6
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All DBs
Position
7:complement(377981..379557)
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AA seq
292 aa
AA seq
DB search
MAGGLDMSLDDLIKSNRKPTGSRGRGNGGSSSGGRGFGGGSGPSRRFSNRVGNRTAPYSR
PLQQQQALDPMWQNDVFATDASVAAAFGNQSGGFGGVVGGSSIETGTKLYISNLDYGVSN
EDIKELFSEVGDLKRYGLHYDKSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIE
IVGTNVSAPTPPVPLAPVQFPFAPNGILGNFNENYNGNFNGNFNGNFRGRGGFMGRPRGG
FGGGNFRGGRGGRGGRGGGGRGNGRGRDEKVSAEDLDAELDKYHKAAAMETS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggcctggatatgtcactcgacgatctaatcaaatctaatcgaaaaccaacg
ggatctcgcgggcgaggcaacggtggttctagtagcggtggtcgcggattcggcggtggc
tcgggtccgtctcgaagattttctaacagagtagggaacagaacggcgccgtattcaagg
ccgttacaacaacaacaagctctagatccgatgtggcaaaacgacgttttcgctactgac
gcgagtgtggcggcggcttttgggaatcagtctggaggctttggcggcgtcgtcggcggc
tcttcaattgagactggaacgaagctctacatctctaacttagattatggtgtctctaac
gaggatatcaaggagctcttctcagaggttggtgaccttaagcgttatgggcttcactat
gataagagtggaagatccaagggtactgctgaggttgttttttcacggcgtggtgatgcc
ttggctgctgtcaagcgttacaacaatgttcagttggatggaaagctgatgaaaattgag
atcgttggaacaaatgtttctgctccaacacctccagtgcctctcgctccagttcagttt
ccctttgcgccgaatgggatacttgggaactttaacgagaactacaatgggaactttaat
gggaacttcaatggaaacttcagaggaaggggtggctttatgggtcggcctcgtggtggt
tttggaggtggtaatttccgaggtggtagaggaggtaggggaggtagaggaggcggtggt
cgtggcaatggaagaggacgtgatgaaaaggtatctgcagaggatcttgatgctgaattg
gacaagtatcacaaggcggcagcaatggaaacgagttga
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integrated database retrieval system