Raphanus sativus (radish): 108817938
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Entry
108817938 CDS
T06014
Name
(RefSeq) myosin-16-like isoform X1
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108817938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108817938
04131 Membrane trafficking [BR:
rsz04131
]
108817938
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108817938
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108817938
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108817938
mRNA cycle factors
P-body specific factors
108817938
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108817938
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108817938
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108817938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
AAA_19
CbiA
Motif
Other DBs
NCBI-GeneID:
108817938
NCBI-ProteinID:
XP_018446267
UniProt:
A0A6J0KE59
LinkDB
All DBs
Position
7:complement(16818692..16826296)
Genome browser
AA seq
1140 aa
AA seq
DB search
MAENVMVDSHVWVEDPDVAWIDGVVVDIKGDVATVKTNDDREVTANLSKLYIKDDEAPSE
GVEDMTRLSYLHEPAVLENLAIRYGLNEIYTYTGNILIAVNPFQGLPHLYDVAVMEKYKE
ASFKELSPHVFAIGGIAYREMINEGRNKCILVSGESGSGKTETTKVLMRYLAYFGGHTAG
EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDIGRISGAAIRTYLLERS
RVCQVSDPERNYHCFYLLCAAPPEDVERFKLGDPKSFRYLNQSSCFELDGVNDAEEYLAT
RKAMDVVGISEQEQDAIFRVVAAILHLGNIEFCKGEDADSSSLKDEQSMFHLQMTSELLM
CDSHSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQ
DSHSRRLIGVLDIYGFESFKANSFEQFCINYTNEKLQQHFNQHVFKMEQGEYEKEEIDWS
YVEFVDNQEVVDLIEKKPGGIIALLDEACMLPKSTPETFSEKLYQTFRDHKRFIKPKLTR
SDFTLVHYAGDVRYQSDQFLDKNKDYVVAEHQDLLNASKCSFLSGLFPPLPKESSKSKFS
SIGARFKLQLQQLMETLNYTEPHYIRCVKPNNLLQPTVFDNANVLHQLRSGGVLEAIRVK
CAGYPTNRTFIEFLNRFIILAPEILKGEYEADVACKWILEKKGLTGYQIGKSKVFLRAGQ
MAELDAHRTRVLGEAARMIQGQVRTRLTRERYVLMRRASVQIQANWRRNIAGNICRHMRR
EEAAIKIQKNLRRQVAKKEYGKTKSSAVTLQSGVRTMVARHEFRYKLKSKAATVIQSYWR
GYSAISDYKKLKKASLVYQSKLRGRIARKQLGQSNQADKKKETEHEREVELSNRVEEAVD
MSSDDAENGDEQYPKIFIRADSGLDKSFVVPSEQSGDEEIEHERQTKHSILTEDGTEKSI
VLEKEKPYNNFSVVSHITNPIRDTEVESLTAEVEMLKALLVVEKQRADISERKCSEAREL
GERRRKRLEETERRVYQLQDSLNRLLYSMSDQFSQLKSILRSPSMSSTVATVPVVRDDLA
DSSENSEASSSDSDFTFPAPSTSSADNSNLQVIVQDLSSTEAKGTENYDNDKERGFEDYF
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacgtaatggtggattctcatgtatgggtggaagacccagatgttgcatgg
attgatggagttgttgttgatattaagggtgacgtagctactgttaaaaccaatgatgac
cgtgaggttactgctaatttatcaaaactctatataaaagacgatgaggctccttcagag
ggagtagaggacatgacacggttgtcttatttgcatgagcctgcagttctcgagaatttg
gctatcagatacgggctcaatgaaatttatacttatacaggaaacattcttattgctgtc
aatccctttcaaggactcccgcatctttatgatgttgcggttatggaaaagtacaaggaa
gcctcgttcaaagagctgagccctcatgtttttgcaattggtggcattgcatatagggag
atgatcaatgagggcaggaataaatgtatattggtaagtggtgaaagtgggtctggaaag
acagaaaccactaaggtgctcatgcgttaccttgcatactttggagggcatactgcaggt
gaaggaaggacggttgagaaccaagttttagaatcaaatccagttctcgaggcatttgga
aatgctaagactgttaagaacaacaattccagtcgttttgggaagtttgtggagattcag
tttgatgacattggtagaatatctggggcagccatcagaacctacctcttggagaggtct
cgtgtttgccaagtttcagatcctgaacgtaattatcactgcttttacctcttgtgtgct
gctcctccagaggatgttgagagatttaaattaggggatcctaagtcatttcgctatctt
aaccaatctagctgcttcgaacttgatggtgtaaatgatgcagaggagtatcttgctact
agaaaagctatggatgtagttggaataagtgaacaagaacaggatgcaattttcagagtt
gtggctgccattctccatcttggaaatattgaattttgcaaaggagaagatgctgattcc
tcatctctaaaagatgaacagtcaatgtttcatctccaaatgacgtcagaattgctcatg
tgtgattcccattccttagaagatgctttgtgtaagcgtatgatggtcaccccagaagaa
gttataaaaagaagtcttgatcctcttggcgctgccgttagtagggatggtttagcaaag
acaatatactctagactctttgattggttggtgaacaagataaatatctctatcggccaa
gactcgcactctaggcgcttgatcggagtccttgatatttatggttttgagagctttaaa
gccaacagttttgaacaattctgcattaattacaccaatgagaagctgcaacagcatttc
aaccagcatgtattcaaaatggaacaaggtgagtatgagaaagaagaaatagattggagc
tacgtggagtttgttgataatcaagaagtcgtggatcttattgaaaagaagcccggtggt
attattgctcttctagatgaagcatgcatgctacccaaatcaactcctgaaacattttcg
gagaagctgtatcaaacattcagggatcataagcgcttcataaaaccaaaattgactcga
tcagattttacattagttcattatgcaggggatgttcgataccagtcggatcaattttta
gacaaaaacaaagactatgttgttgctgagcatcaggatttgttaaatgcttccaaatgt
tcatttttgtcaggtctttttcctcctcttcctaaagagagtagcaaatctaagttttca
tccattggcgctcgtttcaagctacaattgcaacagctgatggagacactgaactatact
gaaccgcactacatcagatgtgtgaagccaaacaatttgttgcagccaacagtgtttgac
aatgccaatgtcttgcatcagttacgctctgggggtgttcttgaggccatcagagtgaaa
tgcgctggatatccaacaaataggactttcatcgaattcttaaatcgatttatcattctt
gcaccggagattctgaaaggagagtacgaagcagatgttgcatgcaagtggattttggag
aaaaagggacttacaggttaccagattggaaaaagtaaagttttccttagagctggtcag
atggcagagctagatgcacacagaacaagggtgctcggcgaagcagcgaggatgattcaa
gggcaagttagaacccgtctgacaagagaacgatacgttctcatgcggagggcttcagtt
caaatacaggctaattggagaagaaacattgcaggaaacatatgcaggcacatgagaagg
gaggaagctgccatcaaaattcagaaaaacttacgtagacaggttgcaaagaaagagtat
ggaaagaccaaatcatcagcagtcaccttgcaaagcggagtccggacaatggttgcacgc
catgaattccgttataagttgaagtctaaggcagcaactgtgatccagtcgtactggcgt
ggttacagtgctatatctgactacaagaaactgaaaaaagcttctctggtttatcaaagt
aaactcagaggaagaattgccagaaaacagttgggacagtcaaatcaggctgacaaaaag
aaagagacagaacatgaaagagaggtggagctttccaatagagtggaagaggcagttgat
atgtcaagtgatgatgcggagaatggagacgaacagtatccgaaaatcttcatccgagca
gatagtggacttgataagtcctttgtagtgccttcagagcaaagtggtgatgaagagata
gaacatgaaagacagacaaaacattccatcctaacagaggacggaactgaaaagtccatt
gttctcgaaaaagagaagccttataataacttttctgttgtaagccacataacgaatcct
attcgtgatacagaagttgagtccctcactgccgaagttgagatgttgaaggccttgttg
gtagttgagaaacaaagagctgacatttccgagagaaaatgttctgaagccagagaactt
ggtgagagaagacgcaaaagattagaagaaaccgaaagaagagtttaccaactacaagac
tctttgaacaggttgttatattctatgtcggaccaattctcgcaactaaaatccatctta
agatctccgtctatgtcttcaacggtggctacagtgccagttgtacgtgatgatcttgct
gacagctctgagaactctgaagcttcctcaagtgattctgatttcacttttccggctcca
tctacttcttctgcagataattcaaatctgcaagtcattgttcaagatctatcaagcaca
gaagccaaaggaacagagaactatgacaatgataaggaaaggggctttgaagattacttt
tga
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