Raphanus sativus (radish): 108817946
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Entry
108817946 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108817946
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108817946
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108817946
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108817946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108817946
NCBI-ProteinID:
XP_018446275
UniProt:
A0A6J0KEE8
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All DBs
Position
7:15463455..15466815
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AA seq
810 aa
AA seq
DB search
MDDSCAVCADNLEWVAYGSCGHREVCSTCVVRLRFVLGDPRCCICKTESPVIFVTKALGD
YTRTINDFSTFPPAPKEGRVAGGFWYHEDTQVFFDDLDQYRMIKAMCRLSCSVCDKAAVE
EEQGGGGGPRHRLRIKSVEQLKGHLYHKHKLNMCNLCLEGRKIFIGEQKLYTRAQLNQHI
HTGDSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMTTEHYTCHICQRSQTGKYEY
YRNYDDLELHFRRDHFLCEDDSCLSKKFIVFPNESELKRHNAIEHGGRMSRAQRTAALQI
PTSFRYSRGNDQESRRGRPRSFRREPGGRDDDYNLAVHAALRLSEAEYSRQEPAPPPSSA
PPPGFSENNNNNRDMDDGDPLIQPMESLSTTDMEPSSRYLQAVGSSGGGGTRLQESAFPP
LAGQPRSGQNLESVPTNTLAARLRRQSNRTASATAIASPSQAWPAVNRASNTSGGGGGNS
SSGWPAIGRTPVVQAPSASAQSRSHARVAQPRPPSYAVPQAARNGNMIPHSSSAPNLSDT
RSLNSDFPPVSAAARKTPTSTITQGTSNSQPPPPPDVQSANKSLVEKMRAALGHDEDLFM
TFKDVSGQYRQGSIDARTYLEYVKGYGLSHLVIDLARLCPDPRRQKELIDAHTASLRNEA
KDNNGQAAATAAGQSSSSQAQESKKNKGKAVKVVDPKEAVADDFMETVRRLQSSQNFHEE
EEVISKDKNEYRSDKGKSKVESSSTGSKQQRKKTSKFHRVRLGDGSMAALLNVNSSYHEP
ESKDDNNNSSNQNQTGVRGVWRKGGAQLFN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgccgtctgcgccgacaatctcgaatgggttgcctacggatcttgt
ggccaccgagaagtctgctccacatgcgtcgtccgtctccgtttcgtcctcggcgatcct
cgctgctgtatctgcaaaaccgagtcccctgtcatcttcgtcaccaaggcgctgggtgat
tacacgaggacgatcaacgacttctcgacgttcccgccagcgccaaaggaaggccgagtg
gcgggagggttctggtaccatgaagacactcaggtcttcttcgatgacttggatcagtac
aggatgatcaaggccatgtgtaggctctcctgcagtgtctgtgacaaggcggcggtggag
gaggagcaaggaggaggaggggggccgaggcatcgtttgaggatcaagagcgttgagcag
ttgaagggtcatttgtatcataagcacaaattgaatatgtgtaatttatgtctcgaaggg
cgtaagatattcataggtgaacagaagttgtatacgagggcgcagcttaaccaacacata
cacactggtgactctgaagttgatggaagtgagagtgaaagaggagggtttgctggacat
cccatgtgtgagttctgtaggaatcctttctatggtgataatgagttgtatactcacatg
actactgagcattatacctgtcatatttgccaaaggtcgcaaacagggaaatatgagtac
tatagaaactatgatgacttggagcttcactttcgtcgagaccatttcctttgtgaagat
gactcttgcctttcaaagaagttcattgttttcccaaacgaatctgagttgaaaaggcat
aacgccatcgagcatgggggtaggatgtctcgggctcagcgaactgctgcattacagata
ccaacgagtttccgatacagtcgtggaaatgaccaagaaagtcgtcgtggaagacctcga
tcattccgtcgcgaacctggtggccgcgatgatgattataatctcgcagtccatgctgct
cttcgtttatctgaggctgagtattctcgacaagagcctgctcctccaccatcaagtgca
ccaccacctggattctctgagaacaacaacaacaacagagacatggatgatggtgatcct
cttatccaaccgatggaatctctttcgactaccgatatggagccctcttcgcgatatctt
caagctgtgggcagttctggtggtggtggtacacgtctgcaagaatctgcttttcctcct
cttgctggtcaacctagatctggacagaacttggagagtgtgcctactaacaccttggcc
gctcgtctaagacgtcaaagcaaccgaactgctagcgctactgccattgctagtccttct
caagcatggccagcagttaaccgagcatctaatacaagtggcggtggcggtggcaactct
tcttccggatggccagcaataggtcgcacacctgttgtacaagcacctagcgcttcagcc
caatctaggtcccatgccagagttgcacagcccagacctcctagctatgcggttccgcag
gctgctcgtaatggaaatatgattcctcactcatcctcagcccctaatctatctgataca
agatcacttaactcagattttcctcctgtttctgctgctgctcgcaagacaccaacatcc
accatcacacagggaacttcaaactcccaaccaccaccacctccagatgtgcaatctgcg
aacaagtcattggttgagaaaatgagagctgcacttggtcatgatgaagatttgtttatg
accttcaaagatgtatcaggacagtatcgtcaaggttcgattgatgcaagaacttacttg
gagtatgtgaaaggttatggattgtcgcacttagttattgatctagctagactctgccct
gaccctagaaggcagaaggaactcattgatgctcacactgccagtttgagaaacgaagca
aaagacaacaatggtcaagctgctgctactgctgcagggcagagttcgtcgtctcaagct
caagagagtaagaaaaacaaagggaaagctgtgaaggttgttgatccaaaagaagcagta
gcagatgactttatggagacagtgaggagattgcaatcctctcagaattttcatgaagaa
gaagaggtaatatcgaaagataagaatgaatacaggtctgacaaaggcaaatcgaaagtg
gagtcttcttcaaccggaagcaagcagcagcgtaagaaaacctcaaagtttcacagagta
aggcttggtgacggatcaatggcagcattgctaaatgtcaactcttcttaccatgaaccg
gaatcaaaagatgacaataacaatagtagtaaccagaatcaaaccggtgtacgtggtgtt
tggcgtaaaggaggggcacaacttttcaactag
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