Raphanus sativus (radish): 108817969
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Entry
108817969 CDS
T06014
Name
(RefSeq) peroxisomal ATPase PEX1 isoform X1
KO
K13338
peroxin-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108817969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817969
Membrane trafficking [BR:
rsz04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
108817969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
NPHP3_N
AAA_5
AAA_22
nSTAND3
RuvB_N
ATPase_2
NACHT
Bac_DnaA
AAA_19
Mg_chelatase
AAA_14
RNA_helicase
IstB_IS21
AAA_18
AAA_11
AAA_2
AAA_7
ATPase
NB-ARC
AAA_30
AAA_24
AAA_28
DEAD
ORC-CDC6-like
ResIII
KAP_NTPase
KTI12
ABC_tran
Zeta_toxin
Sigma54_activat
AAA_lid_PRS2_C
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
108817969
NCBI-ProteinID:
XP_018446307
UniProt:
A0A6J0KE98
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Position
7:complement(4860694..4867477)
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AA seq
1125 aa
AA seq
DB search
METEAVVRTVAGVDCFVSLPRQILHALQSTSSSLLPPLLPVELRSGDRRWPVAWSGSTSS
SSAIEVSRVFAESISLPDGTAVQVRVLSNVPKATLVTVEPETEDDWEVLELNAELAEAAI
LSQVRILHETMKFPLWLHDRTVIRFAVVSTFPPKGVVQLVPGTEVAVAPKRRERNLNAKK
GSDASVKECSNVKIMLRVQETTRSAFHEADVKGFDVRVALTTIAYIHPETAEKFSLESLQ
MVSVSPRKPLKGSMKKDEALNKKNSEASKVVENDTRSSKKEPRRAILRLVISDLAAKGHL
MMVESLRLYLGAGLHSWVHIRGCNVNVNKEVPALSLSPCIFKISEKENVLGRGTDMLGNP
NSDRRSSHPPSGLTTNVDVVDWSVHEKVVTALSSEGLHIEGEQDNAYQLKNKKGLECLTR
LWSLAQRDAIASVTGVDVSSLILGRETLFHFEVGGLESYKSRDGQPSVVDLLEIRKKEKI
VPLEIVYVMTASDESSLGDKFIAYELTLNRSEKKDDVVRIEPVLEKMNLGEPIFFSSAKE
RHCNKGVSPDISSLAWMGSVVSDVIKRMTVLLSPAAGLWFSKFSIPSPGHILIYGPPGSG
KTILARAAAKYFEEQKDLLAHVILVSCSALALDKVQHIRQALSSVIAEGLEHAPSVIILD
DLDSIISSSSDTEGTQASNAITMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQI
PQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLECSEDILLELAAKCEGYDAYDLE
ILVDRAVHAAIGRHIPYEFDVSKYTLVKEDFTRAMHEFVPVAMRDITKSASEGGRSGWDD
VGGVTDVKNAIKEMIELPSRFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR
FISVKGPELLNKYIGASEQSVRDIFAKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVV
NQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEILTVLS
RKLPMADDVDLDPIAQMTEGFSGADLQALLSDAQLAAVHEFLSKEDKSEPGTTPMITDPL
LKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSRESKGKRATLA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagcggtggttcgaaccgtcgccggcgtcgactgtttcgtctcactacct
cgtcagatactccacgcgcttcagtccaccagctcgtctcttctccctccgcttctcccc
gtcgaactccgctccggcgatcgccgttggccagttgcttggtccggctctacctcatca
tcttccgcgatcgaggtctcgagagtgtttgcggaaagcatctcgttgccggatggtaca
gctgttcaggttcgagttctttctaacgtccccaaggctactttagtaactgttgaacca
gagactgaagatgattgggaagttctcgagctcaatgcagaacttgccgaggctgctata
cttagtcaggtgaggatacttcacgagaccatgaagttccctctgtggttgcatgaccga
actgtgataagatttgctgtggtttcaacatttccaccaaaaggggtggtacaacttgtg
ccaggaactgaagtggctgtggctcctaagaggcgtgagaggaatctcaacgcgaaaaag
ggttctgatgcttcggttaaagaatgtagcaatgtgaaaatcatgttacgtgtacaagag
accactagatcagcatttcatgaagctgatgtcaaaggattcgatgtgagggtagccctc
actaccattgcttatattcatccggaaactgccgagaaattctcgctagaatctcttcaa
atggtttcggtatccccaagaaaacctttgaaaggtagtatgaagaaagacgaagctttg
aataagaaaaacagcgaagcttcaaaggtggttgagaatgacactcgcagctcaaagaaa
gagccccgtcgagcaattcttcgtcttgtaatttcagatttagctgctaaaggacattta
atgatggtggagtctcttcgtctctatctaggagcaggccttcactcatgggttcacata
aggggatgtaatgtcaacgtgaacaaagaagttcctgctctttcactttctccgtgcatc
ttcaagatttctgaaaaggaaaacgtgcttggtagaggtacggatatgcttggcaatcca
aattctgatagaagaagcagccatccaccttcgggcttgaccaccaatgtggatgttgtg
gactggtctgtgcacgagaaggttgttacggctctttcatctgagggtttacatattgaa
ggagaacaggataatgcctatcaacttaagaataagaaaggactggaatgccttactcgc
ctgtggtcattggcacagcgtgatgctattgcgtcagtcacaggagttgatgttagttcg
ttgattttaggaagggaaactttgttccattttgaagtgggagggcttgaatcttataag
tcaagagacggacagccttctgttgttgatcttctggaaattaggaagaaggaaaaaatt
gttcctttagaaattgtgtacgtaatgacagcctctgacgagtcttcgcttggtgataaa
ttcattgcgtatgagcttaccttgaatagaagtgagaagaaggacgatgtggtgcgaatt
gagccggtgcttgagaagatgaatcttggcgaacccatatttttctcttctgctaaagaa
agacactgcaataaaggtgtttccccggatatatcttccttggcgtggatgggctcagtt
gtgtcggatgttatcaagaggatgaccgtattgttgtctccggcagctggattgtggttc
agcaaattcagtattccttcacctggacatattctcatatatgggcctcctggttcagga
aaaacaatattagcaagagctgctgcaaagtactttgaggaacagaaagacttgttggca
catgtgattctggtatcctgttctgcacttgccttggataaggttcaacacatccgtcaa
gccctttctagtgtaatcgctgaaggcttggaacatgcaccatccgtcatcattttggat
gatcttgatagcattatctcatcatcttcagatactgaaggaactcaagcttcgaatgcg
attacgatgcttacaaaatttctaacagatgttatagatgattatggggaatacaggaat
tcctcttgtggaattggtccacttgcttttgttgcttctgtccagtctctagaacaaatt
ccacagactttgagctcatcaggaagatttgacttccatgtgcaactggctgctcctgct
acctctgaacgtggggctatactgaagcatgagatacaaaaacgccttttagagtgctcg
gaagatatattactcgagttagctgccaaatgtgaaggatatgatgcgtatgacctggaa
atattggttgatagagctgttcatgctgccattggccgacatattccttatgaattcgat
gtgtccaaatatactctggtcaaggaagactttacgcgagctatgcatgaatttgtgcct
gttgccatgcgtgacatcacaaaatctgcttctgaaggtggtcgttcggggtgggacgat
gttggaggtgttactgatgttaaaaatgctatcaaagagatgattgagttgccatctaga
tttccgaaaatctttgcaaagtctcctctgcgtttgagatcaaatgttctcttgtatggc
ccacctggttgtgggaagacacacatagttggtgcagctgcagcagcgtgttccttacgg
tttatctcagtgaaggggcctgaactcttaaacaaatacatcggtgcttctgaacaatct
gtccgtgatatatttgcaaaggccgcagccgcagcaccatgcatactctttttcgatgaa
ttcgattcaattgctcccaagagaggacatgacaacactggagttactgatcgagttgtt
aatcaattcttgacagaactggatggagttgaagttctgacgggggtctttgtatttgcc
gcaacaagtaggccagatctgcttgatcctgcgctactgaggcctggccggcttgatcgc
cttcttatgtgcgacttcccatccccaccagagcgattagagattcttacagttctctct
agaaagcttccgatggctgatgatgttgacctagatcctatagctcagatgactgaaggc
tttagtggagctgatcttcaagctcttctctcagatgcgcaacttgcagctgttcacgag
tttctgagcaaagaagataaatccgagcctggaacgactccaatgataactgatcctctt
ctgaagtcgatcgcttcaaaaactaaaccatcggtttctgaaaccgagaagcaaaagctt
tatgacatctatagtcagtttctggattcaagaaaatcgtcaagagaatcaaagggaaaa
agagcaaccttagcgtaa
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