Raphanus sativus (radish): 108817985
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Entry
108817985 CDS
T06014
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108817985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817985
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108817985
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
108817985
NCBI-ProteinID:
XP_018446333
UniProt:
A0A6J0KFH5
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Position
2:complement(1524135..1528320)
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AA seq
569 aa
AA seq
DB search
MGLVTSVRDYINRMLQDISGMKVLILDPETVSNVSIVYSQSELLQKEVFLVEMIDSISAS
NESMSHLKAVYLVRPTSENVQKLRYQLANPRFGEYHLFFSNLLKDTQIHILADSDEHEVV
QQVQEFYADFVAGDPYHFTLNMASNHLYMLPAVVDPSGLQRYSDRVVDGIAAVFLALKRR
PVIRYQRTSDTAKRIAQETAKLMYQQESGLFDFRRTESSPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGLQDNKVDLRAIGSLPKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRM
VDDFQQVAKSNQNIQTVEDMARFVDNYPEYKKMQGNVSKHVTLVTEMSKLVEARKLMLVS
QTEQDLACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLA
SRSPKYKQGLVQFLLKQAGVEKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQ
TMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRCVALQNSTNSGIRFIL
GGTAVLNSKRFLMDLEEAQRISRSGSHMV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggggctggtaacatccgtccgcgattacataaaccgtatgcttcaagatatctccggc
atgaaggttctcatactcgaccccgaaacggttagcaacgtaagcatcgtgtattcgcaa
tcggagcttctccagaaagaggttttcctggtggagatgatagattcgatctcggcgtcg
aacgaatcgatgtcgcatctgaaagccgtttatctcgtccgtccgacgtcggagaatgtt
cagaagctccggtaccagctcgcgaatcctagatttggagaataccatttgtttttctcc
aacttgttgaaggatactcagattcatattttggctgattctgatgagcatgaggttgta
cagcaagttcaggagttttatgcagactttgttgctggtgatccatatcatttcacattg
aatatggcgtcaaaccacctgtatatgctcccagcagttgtcgatccctctggtttgcaa
cgctactccgaccgggttgttgatggaattgcggcagtctttctggcgttgaaacgtaga
cctgtcattagataccagaggacctctgatactgctaaaaggattgcacaggaaacagct
aaattgatgtatcagcaagaaagcggtctttttgacttcagacgcactgaaagctctccg
ttgctgcttgtaattgacagaagagatgacccagttaccccattgctgaatcagtggaca
tatcaggcaatggtgcacgaactcataggacttcaagataataaagtagacttgagagcc
attggaagtcttccaaaagatcagcaagttgaggtggttttgtcatcagaacaagatgca
ttcttcaaatctaacatgtacgaaaatttcggggatattggaatgaacatcaagcgaatg
gtagatgactttcagcaggtggctaagagtaaccaaaatatccagacagtagaggacatg
gccagatttgttgacaactaccctgagtacaaaaagatgcagggcaacgtctcaaagcat
gttaccctggttactgaaatgagcaagctagttgaagcaaggaaactgatgctggtttca
cagacagagcaggacttagcttgcaatggtggccaaggagctgcatatgaggcagttacg
gatctcttaaacaatgaaagtgtgtctgacatcgaccggctacgtttggtgatgctgtat
gctttgcgctatgagaaagagaatcccgttcagttgatgcaactgttcaacaaattggct
tcacggtctcccaagtacaaacaagggcttgttcaatttctcctgaaacaagccggagta
gagaagcgaactggtgatctgtttgggaatagagatcttctgaatatagcacgcaacatg
gctcgtggacttaagggggttgagaatgtgtacacccaacatcagccacttctgtttcaa
acaatggagagcataaccagagggagattacgagatgtggattacccctttgttggagat
cattttcaacagggacggccacaagaggtggtgatattcatggtgggtggaacaacgtac
gaggaatcacgctgcgttgctctacaaaactcgaccaactccgggattcggtttattctc
ggcggcaccgcagtgcttaattcgaagaggtttctcatggacttggaagaagcacaaagg
atatcaagatcaggtagccatatggtgtga
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