Raphanus sativus (radish): 108818349
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Entry
108818349 CDS
T06014
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108818349
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108818349
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108818349
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108818349
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108818349
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108818349
Prokaryotic type
108818349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Syntaxin
Motif
Other DBs
NCBI-GeneID:
108818349
NCBI-ProteinID:
XP_018446808
UniProt:
A0A6J0KGV1
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All DBs
Position
7:complement(2277648..2284794)
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AA seq
975 aa
AA seq
DB search
MILQTGFSLPTTTTTFLSPSSPHRLNTLFFTHRRRRLVPPSRLGSCFSKRSFSLCGVAAS
GNNVFTSPETSKSFDFASEEKIYKWWESQGYFKPSFDQGGGSPFVIPMPPPNVTGSLHMG
HAMFVTLEDIMVRYNRMRGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRVELGRDEFTK
RVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDDQLSRAVNEAFVKLHDKGLIYQGSYM
VNWSPNLQTAVSDLEVEYSEEPGFLYHIKYRVAGSPDFLTIATTRPETLFGDVAIAVHPE
DDRYSKYVGETAIVPMTYGRHVPIISDKYVDKDFGTGVLKISPGHDHNDYLLARKLGLPI
LNVMNKDGTLNDVAGLFCGLDRFAVREKLWADLEETGLAVKKEPHTSRVPRSQRGGEVIE
PLVSKQWFVHMDPLAEKALLAVEKKELTIIPERFEKIYNHWLTNIKDWCISRQLWWGHRI
PVWYVVGKDCEEDYIVAKNAEEALEKAHEKYGKDVEIYQDPDVLDTWFSSSLWPFSTLGW
PDVSAEDFKNFYPTNMLETGHDILFFWVARMVMMGIEFTGTVPFTHVYLHGLIRDSEGRK
MSKSLGNVIDPLDTIKDFGTDALRFTIALGTAGQDLNLSTERLTANKAFTNKLWNAGKFV
LQSLPSLSDTSAWESLLALKLDKEETLLSLPLPECWAVSKLHILIDSVTASYEKFFFGDI
GRETYEFFWSDFADWYIEASKSRLYGSGGNSDSLVSQAVLLYVFENILKLLHPFMPFVTE
DLWQALPYRKEALIVSPWPQNSLPRNVESVKRFENLQALTRAIRNVRAEYSVEPVKRISA
SVVGSAEVVGYISKEKEVLALLSRLDLNNVHFTNTPPGDANLSVHVVASEGLEAYLPLAA
MVDISSEVQRISKRLSKMQTEYDALITRLNSPKFVEKAPEEVVRGVKEKAEEAEEKIKLT
KARLDFLKSTSLVSQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgattctccagacgggcttctctctacctacgactactacaacgtttctgtctccctct
tctcctcaccggctcaacactctcttcttcactcaccgacgacgtcgattagttcctccg
tcacgtttgggttcatgtttctcgaaacgtagcttttccctgtgtggtgttgctgcttca
ggaaataatgtctttacttctcccgagacatccaagagctttgattttgcctccgaggag
aaaatctacaaatggtgggagtcgcaagggtacttcaaaccaagtttcgaccaaggtgga
ggcagcccttttgtgatacctatgccacctcctaatgtcactggctctctccacatgggt
catgccatgtttgtcactcttgaggatattatggttcgatataataggatgagagggagg
ccaacgctttggcttccagggactgatcatgctggtattgccactcagttggtagtcgaa
aaaatgctagcatcagaaggcattaagagagtggagttaggtagagatgagtttaccaaa
agagtctgggaatggaaagagaagtatggtggaaccatcacaaatcagattaagagactg
ggtgcttcttgtgattggagtagagagcgcttcactcttgatgatcaattgagtcgagct
gtgaacgaggcatttgtgaagcttcatgacaaaggattgatataccaaggatcctacatg
gtcaactggtcccccaatttacagactgctgtttcagacttggaagtagaatattcggag
gaacctggatttctataccatattaaataccgtgttgctggaagtcctgattttcttact
atagcaacaacccgtccggagacattgtttggtgatgtggccattgccgtgcatcctgag
gatgatcgttattctaagtatgttggtgagacagccattgtacctatgacatatggtcgt
catgtgccaattatctccgataagtatgttgataaggattttgggactggtgttctgaag
ataagtcctgggcatgatcacaacgattaccttcttgcaaggaagctaggtctccccatt
ctgaatgtgatgaacaaggatggaacactaaatgacgttgctggcttgttttgtggcctt
gaccggtttgcggtgagggagaaactgtgggcagatcttgaggagacaggtttagctgtt
aaaaaggagcctcatacttctcgagttccaagatctcagcgtggtggagaagttattgag
ccacttgtaagcaaacaatggtttgtccacatggatcctttagctgagaaggctcttctt
gctgttgagaaaaaagaacttaccatcatacctgagagatttgagaagatatacaatcac
tggctgacaaatattaaggattggtgcataagccgtcagctgtggtgggggcatcgcata
ccagtttggtatgtggttggaaaggattgcgaggaggactacatagttgccaaaaatgct
gaagaagcccttgagaaagcccatgagaagtatggaaaagatgttgaaatatatcaggat
ccagatgttcttgacacctggttttccagctcattgtggccattcagcacccttggctgg
cctgatgtctcagcagaggatttcaaaaacttttaccctacaaatatgttagaaacaggg
catgacatactatttttctgggtagcaagaatggttatgatgggaatagaatttacaggg
accgttccatttactcatgtctaccttcacggacttatacgggactctgaagggagaaaa
atgtcaaaatctcttgggaatgtgattgatccgcttgacacaatcaaagattttggcact
gatgctctgagatttacgattgcactaggaacagctggtcaggatctgaacttatcaact
gaaaggttaactgcaaataaagcgttcaccaacaaactatggaatgctggaaagtttgtg
ctccagagtctgcctagtctcagcgatacatctgcttgggagagtttgctggccctcaag
cttgacaaagaggaaaccctgctcagtttacccttacctgaatgttgggcggtgtcaaaa
ctccatattctcattgattccgtcacagcaagctatgagaagttcttctttggggatata
ggaagagaaacatatgaattcttttggagtgactttgctgattggtatattgaagccagc
aaatctagactctatggatctggaggcaattcagattctcttgtttctcaggcagttctg
ttatatgtcttcgagaatatacttaagctgttgcatccattcatgccgtttgtaaccgag
gatctatggcaggcactaccctacaggaaagaagcgctcattgtatctccctggccacaa
aattcacttccaagaaacgttgaatcagtaaaaagattcgagaatctacaagctctgaca
agagcaattagaaatgtacgagcagagtattcagtagaaccggtaaagcgtatatctgcc
tcagttgttggaagtgcagaggttgttggatacatctcgaaagaaaaggaggtgttagct
cttttatcaaggcttgacttaaacaatgtccactttaccaacacccctcctggtgatgca
aatctctcggtccacgttgtagccagtgaaggactagaggcgtatctaccacttgctgcc
atggttgatatatcttctgaagtccaacgcatttccaaacgtctctccaagatgcaaact
gaatatgacgccctcatcactcgccttaattcaccaaagtttgtggagaaagctccagaa
gaagtggtgagaggtgtgaaggagaaagcagaagaagcagaagagaaaataaagctgacc
aaagctaggcttgattttctcaagtccacttctttagtgtctcagtga
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