Raphanus sativus (radish): 108818405
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Entry
108818405 CDS
T06014
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108818405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108818405
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108818405
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Ion_trans_2
DUF3382
Motif
Other DBs
NCBI-GeneID:
108818405
NCBI-ProteinID:
XP_018446873
UniProt:
A0A6J0KH14
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Position
7:2735054..2738322
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AA seq
733 aa
AA seq
DB search
MPSHTNFLFRWIGLFSGKLRRETTGISENSVVIQTNGGESSSSSSSSDDTPVLSSGECYA
CTQVGVPAFHSTSCDQANAPEWRASAGSSLVPIQERSSSASAQPDPSRARIRRLRGPFGE
VLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVVRT
CLDALHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVP
QAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWG
FALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTANCNLSLSCQEEVCYQFVSPTS
TIGFPCLSGNLTSVVKKPMCLDSDGPFRYGIYGWALPVISSNSLAVKILYPIFWGLMTLS
TFGNDLEPTSNWLEVVFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWW
MKRRQLPSRLRQRVRRFERQRWTALGGEDELELIQDLPPGLRRDIKRYLCVDLIEKVPLF
RGMDDLILDNICDRAKPRVYSKDEKIIREGDPVQRMIFIMRGRVKRDQSLSKGVVATSTI
EPGGYFGDELLSWCLRRPFIDRLPPSTATFVCLDNIEAFSLGSEDLRYITDHFRYKFANE
RLKRTARYYSSNWRTWAAVNIQMSWRRYRKRTCGGVGGSMSPVSEHSVEGNSERRLLQYA
AMFMSIRPHDHLE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcacaccaacttcctcttcaggtggattggactgttttccgggaaactccgc
cgagaaacgactggaatctcggaaaacagcgtcgtcatccaaaccaacggtggagaatcg
agcagtagcagtagcagtagcgacgatacgccggtgctgagctccggcgagtgttacgca
tgcactcaagtcggcgtaccggccttccactccaccagctgcgatcaagccaacgcgccg
gagtggcgcgcctccgccggctcttccctagtcccgatccaggaacgatcatcatccgca
tccgcacaacccgacccgtctcgagcccggatcaggcgcctcaggggtccgttcggcgaa
gtcctcgatcccaggagcaagcgcgtgcagaggtggaaccgcgcgttgctcctagctcgc
gggatggccttggcggttgatccgctcttcttctacgcgctctccatcgggagaaccacc
gggcccgcgtgtctttacatggacggcgcgttcgcggctgttgtaacggttgttcgcacg
tgcctcgacgctcttcacctttggcacgtgtggcttcagttcaggctggcttacgtctcg
agagagtcgctagtagttggctgcgggaagctcgtttgggatccacgcgccatcgcgtcg
cactacgctcgctctctcactggcttctggtttgatgttatagtcatcctcccggttcct
caggctgtgttttggttagtggtgccaaaactgataagagaagagaaggttaagctgatc
atgacgatcctcttgctgatcttcttgttccagttcctccccaagatttatcactgcatc
tgcttgatgagaaggatgcagaaggtcactggttacatctttgggactatttggtggggt
tttgctcttaatctcatagcctatttcatcgcttctcatgtagctgggggatgctggtat
gttctagcaatacagcgtgttgcttcttgtattagacagcaatgcatgaggaccgcgaac
tgtaacctgagtctgtcttgccaagaagaggtctgttaccaattcgtgtcacccaccagc
acaattgggtttccatgcttatctggaaacctcaccagtgtggttaagaagcctatgtgc
ttagactctgacggaccattccgatatggtatctacggttgggcacttcctgtcatctcc
agcaactctcttgcggttaagatcctttaccctatcttctgggggctaatgactctcagc
acattcgggaatgatcttgagcccacaagcaactggcttgaggttgttttcagtatagtt
atggtccttagcgggttattactattcaccctgttgatcggaaacattcaggtgtttttg
catgcggtaatggcaaagaagaggaaaatgcagatacggtgtagggatatggaatggtgg
atgaaacgtaggcagttgccttctaggttaagacagagagttaggagatttgagaggcag
agatggactgccttgggtggagaagacgagctggaacttatacaggatttgcctccgggt
cttcgaagagatattaagcgatatctttgcgttgatcttattgagaaggtaccattgttc
aggggcatggacgatttgatcctagacaacatttgcgatcgtgctaagcctcgtgtctac
tcaaaagacgaaaagatcatccgggaaggagatcctgtacagagaatgatattcatcatg
cgtggaagagtcaaacgtgaccagagcctaagcaaaggcgtggtagccacaagtacgatt
gaaccaggtggttacttcggcgacgagctactctcatggtgcctacggcgtccatttatc
gaccgtcttcctccttccaccgcaacatttgtctgtctagataacatcgaggcgttctcc
ctcggatcagaagatcttaggtacataacggatcatttccgttataaattcgcaaacgag
cgtcttaagcggacggcgagatactactcctcgaactggaggacatgggctgcggtgaat
atccaaatgtcgtggcgccggtacaggaagagaacctgcggtggtgtaggcggttcgatg
agtcctgtgtcggaacatagcgtcgaaggtaacagtgaacgccgtttgcttcagtatgcc
gcgatgttcatgtccatccgaccgcatgatcatcttgagtga
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