KEGG   Raphanus sativus (radish): 108818438
Entry
108818438         CDS       T06014                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03083  Polycomb repressive complex
rsz04120  Ubiquitin mediated proteolysis
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108818438
   04120 Ubiquitin mediated proteolysis
    108818438
  09126 Chromosome
   03083 Polycomb repressive complex
    108818438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108818438
   04121 Ubiquitin system [BR:rsz04121]
    108818438
   03036 Chromosome and associated proteins [BR:rsz03036]
    108818438
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    108818438
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     108818438
   Cul7 complex
     108818438
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108818438
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     108818438
SSDB
Motif
Pfam: Skp1 Skp1_POZ Nup84_Nup100
Other DBs
NCBI-GeneID: 108818438
NCBI-ProteinID: XP_018446910
UniProt: A0A6J0KG82
LinkDB
Position
7:8314187..8315173
AA seq 160 aa
MSTKKIVLKSSDGESFEVDEAVARESQTLAHMVEDDCIENGIPLPNVTSKILAKVIEYCK
KHVDAAAAKTEAVDGGASSDDDLKAWDVEFMKIDQATLFELILAANYLNIKNLLDLTCQT
VADMIKGKTPEEIRATFNIKNDFTPEEEEEVRRENQWAFE
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtcgacgaagaagatcgtgttgaagagctccgacggagagtctttcgaggttgacgag
gccgtggctcgcgagtctcagaccttagctcacatggtcgaggacgactgcatcgagaac
ggtatccctctccccaacgtcacgagcaagatcctcgccaaggtgatcgagtactgcaag
aagcacgtcgacgccgctgctgccaagaccgaggccgtcgacggcggtgcttcctccgac
gatgacctcaaggcgtgggacgttgagttcatgaagatcgatcaagctaccctcttcgaa
ctcatcctggctgctaattatctgaacatcaagaaccttttggacctaacgtgccagacg
gtggctgatatgatcaaaggcaagactccagaagagattcgcgcgaccttcaacatcaag
aacgacttcacacccgaggaggaagaggaggtgcgcagggagaaccagtgggcttttgaa
tga

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