KEGG   Raphanus sativus (radish): 108818458
Entry
108818458         CDS       T06014                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108818458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108818458
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108818458
 Complex B
    108818458
 Complex C
   U2 SnRNP specific factors
    108818458
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 108818458
NCBI-ProteinID: XP_018446933
UniProt: A0A6J0KH84
LinkDB
Position
7:5648364..5649998
AA seq 472 aa
MASSSQDDPNIDPEVRYIMEGTARLVAKHGLWLESRFLEYNVDDKRYNFLRIPNHPYLPF
YRNKIVEYQNALQKQRIKPPCSSTNKVARSPVVKEIKCPEGMTPNDFGVIKLTAQFVVRY
GRYFWPDLVNSVTMNPRPQFAFINASDCRFNVLLELVDAYAKILTPYWKLPGSKHNQHAC
KETFLQGFFNILQGKKHDEEEGVEIEIETERDVVADLHGCLDYFACSDDGKWKSPRRISA
QMLSDGILDALPTDDDDAQGQPVPLSMDLDPPIPRNYPFTYPKAITRRQLGIIKVTAQFY
VRYGYAFYMALKKILAIIDNSHLNSQFEFFKSQDTYSFFYRLVTVYSDVLMPSCTCPEKA
VLKGFFNLLQGGNQEVDVEVVEISESSGFHSYVGALDYFANRKDQELTPHGCFSSAPIQM
LQPCLPMPLPKGFGWRFLLYHCHCLRNQSQRDELNKSSALVPKDQFLVQHSV
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggccagttcaagtcaggatgatccaaacattgatccagaagtcaggtatataatggag
ggaactgcacgtttggtcgctaagcatgggttgtggctggagagcaggttcttggagtat
aatgtggatgataaacgatacaactttctgaggatcccaaaccacccttatctccctttt
tataggaacaagattgttgaataccaaaatgctctgcagaaacaacgtatcaaacctcct
tgttcttctaccaataaagttgcacggtctccagtcgtaaaagaaattaagtgtcctgaa
gggatgacccccaatgattttggcgttattaaactcacagctcagttcgtggtgcggtat
gggaggtatttctggcccgatttggtgaatagtgtgactatgaacccgagacctcaattt
gcatttatcaatgcaagtgattgcagatttaatgttttacttgagcttgttgatgcttat
gctaaaattttaacgccttactggaagctgccagggagtaaacataaccaacatgcttgc
aaagagacatttctccaagggtttttcaatattcttcaagggaaaaagcatgatgaggag
gagggagtagagatagagatagagacagagagggatgttgttgctgatctgcatggatgt
cttgactattttgcttgtagtgatgatggaaagtggaaatcccctagacgcatttcagca
caaatgctgtctgatggtatacttgatgctctaccaactgatgatgatgatgcacaaggc
caacccgttcctctatctatggatcttgatcctccaatacctcgtaattatccatttaca
tatcctaaagcgatcacacgtaggcagcttggtattatcaaggtcacagcgcagttttat
gtgaggtatgggtatgcattctacatggccttgaaaaagatactggctataatcgacaac
tctcatctaaactctcagtttgagtttttcaagtcacaagatacgtacagctttttctat
cggcttgttactgtttattccgacgtattaatgccttcgtgtacttgtccggagaaagct
gtcctcaagggtttcttcaatcttcttcaagggggaaatcaggaggtagatgtggaagta
gtggagatatccgagagtagtggttttcactcttacgtgggtgcgcttgactattttgct
aacaggaaggatcaagagttgacaccacatggatgtttttcttcggcaccaatacaaatg
ctgcagccttgtttgcctatgccgcttccaaagggatttgggtggcgtttccttctctac
cactgccactgtttgaggaaccagagccaaagagacgagcttaataagtcgtcagcactt
gttccaaaagaccagtttctcgttcaacattcggtttaa

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