Raphanus sativus (radish): 108818466
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Entry
108818466 CDS
T06014
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108818466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108818466
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108818466
Transfer RNA biogenesis [BR:
rsz03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108818466
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Arg_repressor
Motif
Other DBs
NCBI-GeneID:
108818466
NCBI-ProteinID:
XP_018446943
UniProt:
A0A6J0KH96
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All DBs
Position
7:13030329..13038159
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AA seq
1067 aa
AA seq
DB search
MAILSISFPLIVSFLRPHVSPRFLHLPRYLPRSPYRRFHRTAVSAVSSNVHHHPSYGKSD
DDNGSNSVSVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPSTFLRVLGPEPWNV
AYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFINSLSALGIDVTQHDIRF
VEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQE
VDHFKNILYADGITYGELFLENEKEMSSYFLEHASVDRLQKHFDYFDEEARSLLALGLPI
PAYDQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGVAS
EHIPPIHHGAALENVAEKVPEDPRSFIIEIGTEEMPPQDVINASEQLRVLVVQLLENQRL
RHGVAKAFGTPRRLVVLVDAMSPKQLEEEVEVRGPPASKAFDDQGNPTKAAEGFSRRYGV
PLEKLYRKVDGKTEYVHARVTQPARLALEVLSEELPGILAKISFPKSMRWNSSVMFSRPV
RWVMALHGDLVVPFCFAGNTSGNASSGLRNTASATLLVDTAESYEDTMRNAGINIEIEER
KKIILDKSNALAKSVNGRVVVQQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQ
KHQKYFSITDESGKLLPYFIAVANGAINEDVVRKGNEAVLRARYEDAKFFYEVDTRKRFS
EFRDQLKGILFHEKLGTMLDKMNRLEKMVTKLCLALEVDEDLLPVVEEAASLALSDLATS
VVTEFTSLSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDAGMVLAIGDRLDS
LVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKHALEIAASVQPINVEANTL
DDVYQFVTRRLEQLLVDNGISPEVVRSVLAERGNDPCLASRTAYKMEKLSKGEIFPKIVE
AYSRPTRIVRGKDLDVGVEVDESVFETSQERELWNIYTSIKDRIHSGIGIEEFTEISTQL
VEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPSGIADLSFLPGF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctctctatctctttcccactcatcgtctccttcctccgtccacacgtctct
cctcgctttctccacctccctcgctacctccctcgatccccttaccgccgatttcaccgc
accgccgtctccgccgtttcctccaatgttcatcatcacccttcctatggcaagtccgat
gatgataatggcagcaactccgtctctgttcctacattccaacaagcaattcaacgcctc
caggagtattgggcttctgttggatgcgcagttatgcagcccagcaacactgaggttgga
gctggcactatgaatccttccacgtttttgagggttcttggccctgagccatggaatgtt
gcctatgttgagcctagcatacgtcctgatgactctcgctatggagagaatcccaatagg
cttcaaaggcacactcagtttcaggtcatcttgaaacctgatcctggcaactctcaggac
ctctttatcaacagtctctctgctttaggtattgatgtgactcaacacgatatccggttt
gttgaagacaattgggagagcccggtgcttggtgcttgggggttgggatgggagatttgg
atggatggtatggaaatcacacaatttacttactttcagcaggctggaagccttcagctg
tctccagtatctgttgaaataacttatggccttgagcgcatcctcatgttgcttcaggaa
gttgaccatttcaagaatatcttatatgctgatggaatcacttatggggagcttttcctg
gaaaacgagaaggaaatgagctcatattttctagagcatgctagcgtggaccgtcttcaa
aagcatttcgattattttgacgaagaagcacgttccttgcttgccttaggcctcccaatc
cctgcgtatgaccagctactgaagacgtctcacgctttcaacatcttagatgctagaggc
ttcgttggtgtaactgaacgtgctcgttattttggtcgaatgcgcagcttggctcgccag
tgtgcccaactgtggttaaagacacgtgaatctcttggacatcctcttggtgttgcctct
gaacatattcctcccattcatcacggagcagctttagaaaacgtggctgaaaaggttcct
gaggatccaagatcatttatcattgagatagggactgaagagatgccacctcaagatgtt
atcaatgctagcgaacaactcagggttttagtcgtacaattgctagagaaccaaagattg
cgccatggcgttgcgaaagcatttggcacacctcgtaggctagtggttttagttgatgct
atgtcccctaagcagctggaagaggaggttgaagttcgagggccccctgcgtctaaagcg
tttgatgatcaaggaaatcctacaaaggccgcagaaggttttagccgtagatatggtgtt
ccattggaaaaattgtacagaaaagttgatgggaagacagaatatgttcatgcacgagtt
acacagccagctcgacttgcattggaggtcctgtcagaagaattaccaggtatactggct
aaaatatcgttcccaaagtcaatgcgctggaactcgtcagtaatgtttagtaggcccgtt
cgctgggttatggccttacatggggatctggttgtaccattctgctttgctggcaacaca
agtggaaatgcttcttccggacttcgcaacactgcttcagcaacattgttggtagatact
gcagagtcctatgaagatactatgaggaatgctggaatcaatattgagattgaggaaagg
aagaaaatcattcttgacaaatcaaatgcattagcaaaaagtgttaatgggcgtgttgtt
gtccagcagaacttactgaatgaggttgcaaatctcgtcgaagctcctgtgccattaatt
ggaaagtttaaggaatcatttttagaactaccagaggagctattaactattgttatgcag
aagcaccagaaatatttttccattactgacgagagtggaaagctattgccttactttatt
gctgttgccaatggtgcaataaatgaggatgtggtgaggaaaggaaatgaagcagttctc
agggcacgatatgaagatgccaagttcttctatgaggtagacacaaggaaaaggttttct
gaatttcgagatcagcttaagggaattcttttccacgaaaagctggggacgatgctggat
aagatgaaccgtctagaaaagatggtaactaagctttgtttagccctcgaagttgatgaa
gacctgcttccagttgtggaggaggctgcttcacttgctctgtcagaccttgcaacttct
gtggttacagaatttacttccttgtcaggaataatggctcgtcattatgctctcagagat
ggctattcagagcagattgcagaagctttgctggaaatcacacttcctagattttctgga
gatgtcatccctaaaacagatgcaggaatggttttggcaataggtgatagattggatagc
ctcgttggtctatttgctgctggttgccagccaagttcaacaaatgacccatttggcctt
agaagaatatcttatggcttagttcagattctggtcgagaaggataaaaatgtcaacttc
aaacatgctctagaaattgcagccagtgtacaaccaataaatgttgaggcaaacacttta
gacgatgtatatcaatttgttactcgaagacttgaacagcttctggttgacaacggaata
agccctgaagtagtgaggtctgtcctagcagaacgtggaaatgatccttgtctggcatca
cgaactgcatacaagatggaaaagctgagcaaaggtgagatctttccgaagatagtggaa
gcatattctcgtcccacacgaattgtccgtgggaaagatcttgatgttggagttgaggtg
gatgagagtgtatttgagacttcccaagagagagagttgtggaacatttacacctccatc
aaagatcggattcacagtggcataggaatcgaggagttcacagagatatcgacgcagttg
gtggagccgctggaagatttcttcaacaatgtgtttgtgatggtggaggaagaaagagtg
aggaagaacagactggctcttctaaataacattgccaatcttccctcaggaatcgctgac
ctttcatttttgcctggtttttga
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