Raphanus sativus (radish): 108818648
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Entry
108818648 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108818648 isoform X1
KO
K14841
ribosome biogenesis protein NSA1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108818648
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108818648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
PQQ_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
CDC45
Motif
Other DBs
NCBI-GeneID:
108818648
NCBI-ProteinID:
XP_018447069
UniProt:
A0A6J0KJ77
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All DBs
Position
8:5873995..5876481
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AA seq
444 aa
AA seq
DB search
MPRVITNETYGCPPIRALTFDSLGLIKVTEARGKERGTPTVVNTWGEANASRCVLASSMD
DRLTNPLLAVARKDGNVEVLNPCNGDLHFAYSVFGDDGSSSTEDDDEVSGLHLFRKQKDD
QAAERSCRLLTCTKKGDVSLRTVKFRDARSDDSTDEAAPNTWKACGSGEVLVGKVDGSEN
FGLFGGKRVEVSIWDLEQCAKIWSAKSPPKDNLGIFTPTWFTCAAFLSNEDHRKFVTGTK
SHQVRLYDVSAQRRPVLSFDFLETAITAVSEDPDGHTVYVGNASADLAAFDIRTGKLLGN
FLGKCSGSIRSVVRHPHHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGFS
GEEIAVANTVVEAETEEGMTIQEDDEEDNEDKTEEAPVKKKKPKKEKRSRDKVSEKGEEI
DEVRSKKTRDHKKKTKKVKHTRED
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtcatcaccaacgagacctacggttgccctccgatccgagctttaaccttt
gactctctcggcttaatcaaagtgactgaagctcgaggcaaagagagaggaactccaact
gtagtcaacacatggggggaggcgaacgcatccagatgcgttctcgcctcttccatggat
gataggcttactaacccgcttctggctgtggcaagaaaagacggcaacgttgaggttctt
aatccttgtaatggtgatcttcactttgcatactctgtatttggtgatgacggttcttct
tcaactgaggatgatgacgaagtctctggtttgcacttattcagaaaacaaaaagatgat
caggcagcagaaagatcttgcagattgcttacatgcacgaagaagggagatgtgagcctc
agaacagttaagtttcgcgatgcacgtagtgatgattctacggatgaagctgctcccaat
acttggaaagcatgtggttctggtgaagtgttggttggtaaagttgatgggagcgagaac
ttcggcttgtttggagggaaacgtgttgaagtcagtatatgggatcttgaacaatgtgct
aagatctggagcgccaaatctcctccaaaagacaatctcgggatcttcacaccaacctgg
ttcacttgtgctgccttcttgagcaacgaagaccatcgtaaatttgtcactggaacaaag
tctcaccaggttcgtctttacgatgtttctgctcagcgtagaccggtcctgtcctttgat
tttcttgagacggctattacagcagtctctgaagatccggatggtcatactgtttatgtc
gggaatgcttctgctgacctcgctgcctttgatatacgaacaggaaagctgttgggaaac
tttttagggaagtgttctggaagcataagatctgtggttagacatccacatcatcaagtg
atagcttcttgcgggttggatcgatatttacgagtctatgacgtgaagacacgccagctc
atctctgcggttttcttgaagcagcatcttacaggtcttgtattcgactcaggctttagt
ggtgaagagatagctgtagcaaacacagtggttgaggctgaaacagaggagggaatgacg
atccaggaagatgatgaagaagataatgaagataaaacagaggaggctcctgtgaagaaa
aagaagccaaagaaagaaaaacgaagtagagataaagtctcagagaagggtgaagagata
gacgaggtaagaagcaagaagacacgagaccacaagaagaaaaccaagaaagtaaaacac
actcgagaagactaa
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