KEGG   Raphanus sativus (radish): 108818767
Entry
108818767         CDS       T06014                                 
Name
(RefSeq) ras-related protein RABG3d
  KO
K07897  Ras-related protein Rab-7A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04144  Endocytosis
rsz04145  Phagosome
rsz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108818767
   04145 Phagosome
    108818767
   04148 Efferocytosis
    108818767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108818767
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108818767
   04031 GTP-binding proteins [BR:rsz04031]
    108818767
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    108818767
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108818767
  Exosomal proteins of other body fluids (saliva and urine)
   108818767
  Exosomal proteins of colorectal cancer cells
   108818767
  Exosomal proteins of bladder cancer cells
   108818767
GTP-binding proteins [BR:rsz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    108818767
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 cobW RsgA_GTPase Septin nSTAND3 AAA_16 PduV-EutP ATPase_2 AAA_7 AAA_24 NACHT AAA_22 RNA_helicase ABC_tran NTPase_1 G-alpha AAA_14 TniB MCM ATP-synt_ab SRPRB AAA_5
Other DBs
NCBI-GeneID: 108818767
NCBI-ProteinID: XP_018447205
UniProt: A0A6J0KH33
LinkDB
Position
8:26157898..26159721
AA seq 206 aa
MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVLGNKTDIDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE
PEEEPYMPDTIDVARGQQQRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcttctcgccggagagttcttctgaaggttatcatcctcggtgatagcggggttggc
aagacatcgttgatgaatcagtttgtgaatcgcaagtttagcaatcagtataaagctacg
attggagctgatttcttgaccaaagaggttcaaatcgatgacaggatcttcactttacag
atttgggatactgctgggcaagaaaggttccaaagtctgggagttgctttctacagagga
gctgattgttgtgttcttgttaacgatgtcaatgttatgaagtctttcgagaatcttaat
aactggagagaagagttcttgattcaggctagtccatcagatcctgagaacttccccttt
gtcgtgttggggaataagaccgatattgacggtggcaagagccgagtggtttctgagaag
aaagcaaaggcatggtgtgcatctaaaggtaacattccttactttgagacatcggctaaa
gaaggattcaatgtcgacgcggctttcgaatgcatcaccaagaatgccttcaagaatgaa
cctgaagaagaaccgtacatgcctgacactattgatgttgctagaggtcagcaacaaaga
tcaacagggtgtgaatgctaa

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