Raphanus sativus (radish): 108818858
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Entry
108818858 CDS
T06014
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
rsz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108818858
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108818858
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108818858
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108818858
03036 Chromosome and associated proteins [BR:
rsz03036
]
108818858
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108818858
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108818858
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108818858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
VMR2
DUF4187
Motif
Other DBs
NCBI-GeneID:
108818858
NCBI-ProteinID:
XP_018447307
UniProt:
A0A6J0KH72
LinkDB
All DBs
Position
8:278614..282296
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AA seq
534 aa
AA seq
DB search
MKMDIIVGVDEDVHLLDPDLLHLPSLSPSPRSRHIADELFSHWLSLPETASLVKCLIDDA
KSGTPTKSYPTTINVPGPTTALPSVFLSNGTPPRSSPGSPRFSRQRASPPSLRSPLRSVK
EPKQELVPQFYFLNGRPPAKELKEQCISMVDHFFSNSIDGLHIDEFKSVTKEVCKLPSYL
SPALFRKIDTGCSGVVTRDAFIKYWIDGNMLTMDTASQIYNILKQQDCKYLRQADFKPLL
DELLATHPGLQFLNTTCEFQERYAETVIYRIFYYINRSGTGCLTLRELKRGNLIAAMQQL
DEEDDINKIIRYFSYEHFYVIYCRFWELDGDHDCFIDKDNLIKYGNHALTYRIVDRIFSQ
APRKFTSKVEGKMSYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGVITPNEIQFFFEE
QLHRMECITQEPVHFNDILCQIIDMIKPEEEKCITLQDLKGSKLSGNVFNILFNLNKFMA
FETRDPFLIRQEREDPSLTEWDRFAQREYVRLSMEEDVEEVSNGSADEPLEPPF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggatattattgttggagtagacgaagatgttcatttattagatcccgacctc
ttgcatctcccttctttgtctccttctccgcgctctcgtcatattgctgatgaacttttc
tcccactggctctccctccctgaaactgcctcattggtcaagtgtttgattgatgacgct
aaatctggaacaccaactaagagttaccccaccaccatcaatgttcctggtccaacaact
gctttgccatctgtctttctcagcaacggcactcccccacgcagctcccctggttctcca
cgcttctcgaggcagagagctagccctccatctctccgctctcctctgagatcagttaag
gaacctaagcaagaactcgttcctcagttctacttcctcaatgggcgtccaccagcgaaa
gagctaaaggagcaatgtatatccatggttgatcatttctttagtaactctattgacgga
ctacatatcgatgaattcaaatctgttacgaaagaagtctgcaagctcccttcttatctt
tctcccgcgcttttcagaaagattgataccggttgcagcggtgtagttacaagggatgca
tttatcaagtattggattgatggaaatatgttgactatggacacagcctcccagatatat
aatatactaaagcagcaggactgcaagtacctcagacaggcagacttcaaaccacttctg
gatgagcttctggcaacacatcctggcttacaatttctgaacactacatgcgaatttcaa
gaaagatatgctgaaacggtcatctacagaatattttactacattaacagatccggaact
ggctgccttactcttagagagctgaaacgcggaaatcttattgctgctatgcaacagctt
gatgaagaagacgacatcaataaaattattaggtacttctcctatgagcacttttacgtg
atctactgcaggttctgggaacttgatggtgaccatgactgctttatcgataaggacaat
ctcatcaaatatggtaaccatgcccttacctacaggattgttgataggatattttctcag
gctcctagaaaatttacgagcaaagttgaagggaagatgagttatgaagattttgtatac
ttcattctcgccgaggaagacaagtcatctgagcctagtcttgagtactggttcaagtgc
attgacttggatggaaatggggtgatcactccaaacgaaatacaattttttttcgaagag
cagctgcatcgcatggaatgcataacccaggaacctgttcatttcaacgatatcctatgt
cagatcattgacatgattaaaccagaggaggagaagtgtatcaccctccaggatctgaaa
ggatccaaactttcaggaaacgtcttcaatatactcttcaaccttaacaaattcatggct
ttcgaaacacgtgaccctttcctcattcgccaggaacgggaggatccaagtttaacagag
tgggatcgcttcgctcagagagagtatgtgagattgtcaatggaagaagatgtggaggaa
gtctcaaatgggagtgcggatgaaccactggaacctccattttag
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