Raphanus sativus (radish): 108818963
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Entry
108818963 CDS
T06014
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108818963
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108818963
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108818963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf_RING_Vps8_fungal
Prok-RING_4
DUF2921
zf-RING_Vps41
zf-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
108818963
NCBI-ProteinID:
XP_018447430
UniProt:
A0A6J0KHR6
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All DBs
Position
8:9040940..9044889
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AA seq
564 aa
AA seq
DB search
MKKRQHLGVLRLGLELQIIIWLSIWVAFPQQAAGLRPIREKARTWSDEWLFGRKQVSEAG
RFSAWNITGTYRGNWKFLDSLNNSSKFQDFQKSNGNSVVELVAVPTKITGVHYVQGVVVF
HDVFDNEQNLGGAQISLEGVYIWPFRQLRLVANSGKESDSGQDENNLLSNPYHLLGIFSS
QVFQESTRDRILQRKISPRNEMDKHCNIELAAQISRVASSDNNGDKSYYHMDGLMESPGV
GDDGDCFSPMLLNATSLNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAKV
SIVMIGHQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATR
PSNSGEGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRPILLLMYSFWIPQIVTNVI
RDSRKPLHPYYILGMTATRLAIPLYVFGCPHNFMRVEPSKAWCVSVCTFMGLQAVVLLLQ
HYFGSRCFVPRQMLPEKYNYHRRFNQDVSRNTDCVICMTAINLRQRTSDFMVTPCEHLFH
TGCLQRWMDIKMECPTCRRSLPPA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtcaacatttgggggttttgagattagggcttgaattgcagatcatcatc
tggttatcgatttgggtggcgtttccgcagcaagcggcggggcttagacccatcagagag
aaagctcgaacctggagcgacgagtggctctttggtagaaaacaagtatctgaagcagga
cgattttccgcatggaacataacaggaacatatagaggaaattggaagtttctggattcc
ttaaataactcttccaagtttcaagacttccagaaatcaaatggtaattctgtggttgag
ttagtggctgttccaactaagataaccggtgtgcattatgttcagggtgtagttgttttc
catgacgtatttgacaatgaacaaaatttgggtggtgcccaaataagtctggaaggtgta
tatatatggccctttagacaactccgcctcgtggctaacagtggcaaggagagtgattca
gggcaagatgagaataatcttctctcaaatccctatcatctgctcggaatcttttcctct
caagtgtttcaagaatctacaagagacagaatactgcaacggaagatttcgccaagaaat
gagatggataagcactgtaacatcgaattagcagctcagatatcccgtgtggcttctagt
gacaacaatggagacaaaagttattatcacatggacggcttgatggaaagtccaggggta
ggcgatgacggagattgtttctcgcctatgctcctgaatgcgacttctttgaatgttgaa
gtctactataacaaagctgtgaactatacactgatggtcacttttgtctctttcctccag
gttcttttgttgatccggcaaatggagcacggtaacacacaatctggtgctgccaaggta
tccattgtaatgatcggacatcaagcaatcatggatgcttacttatgccttttgcatctc
actgctgggatattagttgaatctctatttaatgcatttgcaacggctgcgttcttcaag
ttcgtagtcttttcgatttttgagatgagatatcttctggccatatggaaagcaaccagg
ccttccaacagcggagaaggttgggaaacaatgaggcgtgaactctcctttctctacagc
cgtttctatgggatccttcttggagggatattgataatgtacgagttgcacaactacatg
cggccgattcttcttctcatgtactcattttggataccacagatagtcaccaatgtcatc
cgagattcaagaaagcctctgcacccgtattacatcttggggatgactgctacacggtta
gctataccgttatatgttttcggatgcccacacaacttcatgcgtgtggagcctagcaag
gcctggtgcgtgtccgtgtgcacattcatggggttgcaagctgtcgttcttcttcttcag
cattattttggttcacgttgctttgttccccgccagatgctaccagagaagtacaactac
catagaagattcaatcaggacgtaagccgcaacactgattgcgtcatctgcatgacagct
attaatctcagacagcgtaccagtgatttcatggtaactccatgtgaacatttattccac
acgggatgcttacagagatggatggatataaaaatggagtgccctacctgtcggcgttcc
ctgcctccagcttag
DBGET
integrated database retrieval system
