Raphanus sativus (radish): 108818990
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Entry
108818990 CDS
T06014
Name
(RefSeq) histidine--tRNA ligase, chloroplastic/mitochondrial
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108818990
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108818990
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108818990
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108818990
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108818990
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108818990
Prokaryotic type
108818990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
DUF4473
Motif
Other DBs
NCBI-GeneID:
108818990
NCBI-ProteinID:
XP_018447472
UniProt:
A0A6J0KHP3
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Position
8:6459576..6462099
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AA seq
490 aa
AA seq
DB search
MRAIQFVTTRLSSCLRPIRFEFVSSSSSPRLFSNTRRLICTAAATKSNGGRSGSIVAPLV
NEKEEEEVEKIDVNPPKGTRDFAPEDMRLRNWLFNHFKEVSRLFGYEEVDYPVLETEALF
IRKAGEEIRDQLYCFEDRGKRRVALRPELTPSLARLVIQKGKSVSLPLKWFAIGQCWRYE
RMTRGRRREHYQWNMDIIGVPHVTAEAELISSIVTFFKRIGITSSDVGFKVSSRKVLQEM
LRKYGVPENLFGRVCIIIDKIEKIPIDEIKKELGSTGISEDAIEQLLQVLSVKSLDDLED
VLGGAGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLSYYTGIVFEGFDRKGNLRAICG
GGRYDRLLPTYGGDDIPACGFGFGDAVIVELLKEKNLLPELGQEVENIVCALEKDLQGAA
ATVATALRSKGQTVDLVLESKPLKWVFKRAARINARRLILVGKTEWEDGSVSVKVLSSGE
QFQVKLSDLE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaattcaattcgtgacgacgcgactgagctcgtgcttgagacctattcgattc
gaattcgtttcttcttcttcttcgcctcgattgttctctaacactcggcgccttatatgc
accgccgccgcgacgaaatcgaacggaggcaggtccggttcgattgtggctccattggtg
aatgaaaaggaagaagaggaagttgagaagatagatgtgaatccacctaaaggaactcgc
gatttcgctcctgaggatatgcgtctccgcaactggctcttcaaccatttcaaagaggta
tcacggttatttgggtatgaagaagtggattatccagtgttggagacggaggccttgttc
atcagaaaagcaggcgaggagattagagaccaactttactgctttgaagataggggtaaa
cggcgtgtagcattgaggcctgagcttactccttctttagccaggcttgtcattcagaaa
ggaaaatcagtttcccttccgttgaagtggtttgcgattgggcagtgttggcggtacgag
agaatgacaagaggaaggagacgcgagcattaccagtggaacatggatattattggtgtc
cctcatgtcactgctgaagcagaactcatttcgtctatagtcaccttcttcaagcgaatt
gggatcacttcatctgatgttggttttaaagtttctagccgcaaggtcttacaagaaatg
ctaagaaaatatggggtgcctgaaaacttgtttggcagagtttgtatcattattgacaag
atagaaaagatccccattgatgaaataaaaaaggaacttgggtccacgggaatatcagaa
gatgctattgaacagctactgcaagtgctttctgtcaagtccttggatgatttggaagat
gtacttggtggagctggagaagccattgcggatctgaaacaactcttctcacttgctgaa
aagtttggttattcagagtggatacagtttgatgcgtctgttgtgcgtggtctgtcttat
tacactggtattgtctttgagggatttgatcgaaaagggaatctacgagctatatgcggt
ggtgggagatacgacagattactccccacttatggaggcgatgacattcctgcttgcggt
tttggtttcggcgatgctgtaattgttgaacttcttaaggagaagaatttgttgccagaa
ttgggacaagaggtagagaacattgtgtgtgcgttggaaaaagatctccaaggagctgca
gccactgttgcaaccgctctcagaagcaaaggccaaaccgttgatttggtattggagagt
aaaccgttgaaatgggtgttcaagagggcggctcggataaacgcaagaaggctgatactg
gttgggaagacagagtgggaagatggttcagtgagtgtgaaggttttgtcttcaggagag
cagttccaagtaaaactcagtgacttggaatag
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