Raphanus sativus (radish): 108819038
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Entry
108819038 CDS
T06014
Name
(RefSeq) protein transport protein SEC23 B
KO
K14006
protein transport protein SEC23
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108819038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108819038
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108819038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
108819038
NCBI-ProteinID:
XP_018447524
UniProt:
A0A6J0KKI8
A0A9W3CCR2
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSEMESMDPEGIDGVRMTWNVWPRNKVEASKCVVPVAACISPIRYHRDIQSVPYAPLRCR
TCSAALNPFARVDFDAKIWICPICFQRNHFPPHYHVISETNLPCELYPQYTTVEYAMPSQ
PTDAQGSSSQPSSVFVFVLDTCMIEEEFGYAKCAVRRAVGLLPENALVGFVSFGTQARVH
ELGYSDLTKVYVFRGDKEISRDQVLEQLGLGVSGRRGGHAGGFPMGRDGSSGVSRFLLPA
SECEFTIDSLLDELQTDQWPVQSGRRQSRCTGVALSVATGLLGACLPGTGARIVALVGGP
CSEGPGTIVSKDLSEPLRSHKDLDKDAAPFYKKAEKFYDGLANQLVNQGHVLDLFASALD
QVGVAEMKAAVERTGGLVVLSESFGHSVFKDSFKRVFEGGEQSLGLCFNGTLEINCSKDI
KIQGIIGPCASLQKKGPSVADTVVGEGNTTAWKMCGLDKSTCLTVFFDLSSSDQSTNPGA
VNNQLYIQFMTSYQNPEGKSLLRVTTVTRQWVDTALSTEELVQGFDQETAAVVVARLASF
KMETEEGFDATRWLDRNLIRLCSKFGDYRKDDPASFTLNQNFSLFPQFTFNLRRSQFVQV
FNNSPDETAYNRMLLNRENISNAAVMIQPSLTTYSFSTLPQPALLDVASIAADRILLLDS
YISVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLEAPQEDAQMIVRERFPVPRLVVCDQHG
SQARFLLAKLNPSATYNNPSEMNAGSDVIFTDDVSLQVFFQHLQKLAVQS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatggagagcatggatccggaaggaatcgacggagtccggatgacgtggaac
gtctggccacgcaacaaagtcgaggccagcaagtgcgtcgtccccgtggcggcctgcatc
tccccgatccgctaccaccgcgacatccagtccgtcccctacgcccctctccgctgccga
acctgctccgccgctctcaaccccttcgcgcgagtcgacttcgacgccaagatctggatc
tgccccatctgcttccagcgcaaccacttccctcctcactaccacgtcatctccgagacc
aacctcccctgcgagctctaccctcagtacaccaccgtcgagtacgccatgccttctcag
cccactgatgcccagggctcctcctcccagccttcttcggtgtttgttttcgtgctggac
acgtgtatgatcgaggaggagtttgggtacgccaagtgtgcggttaggagggcggttggg
ctgcttccggagaacgcgctcgttgggtttgtgtcgttcgggacgcaggcgcgtgtgcat
gagttggggtattctgatctgacgaaagtttatgtgtttagaggggataaggagatttcg
agagatcaggttttggagcagttagggcttggcgtttctgggaggagggggggacatgct
ggtgggtttcctatggggagagatggctcttctggtgttagtaggttcttgttgcctgct
tctgagtgtgaattcaccattgattcgctgttggatgagctacagacggatcagtggcct
gttcagagtggacgtcgtcagtcgaggtgcacgggagtggctttgagtgtggcgacgggt
ctgcttggagcttgtttacctggaactggggctaggatcgtggctttagttggagggcct
tgctctgagggaccaggcacgattgtgtcaaaggatctttcagagcctttgcgttcacat
aaagacctggataaagatgctgctccattctataagaaagcagagaagttttatgatggt
ctcgccaaccaattggttaaccaaggacatgtacttgacctttttgcatccgcacttgat
caggttggtgttgctgaaatgaaagctgcggttgaaagaactggaggacttgttgtctta
tcagaaagttttggtcattctgtattcaaggattccttcaagcgagtgtttgaaggtggc
gaacagtctctcggcctttgtttcaatggtacacttgagatcaactgttccaaggacata
aaaatccaagggattattggaccttgcgcgtcattgcaaaagaaaggccctagcgttgct
gatacagttgttggggaggggaatactacagcatggaagatgtgtggtctcgacaaaagt
acttgtctgacagtcttctttgatctttcttcaagtgatcaatcaactaatcctggagct
gtaaataaccagctatatatacagtttatgacaagctaccagaatccagaaggtaaatca
ttacttcgagttactactgttaccagacaatgggtagatactgctcttagcacagaggaa
ctggtgcaaggttttgatcaagaaactgctgctgtcgtggtggccagactagcttccttt
aagatggaaacagaggaggggtttgatgctactcgatggctagacaggaaccttattcgt
ctctgttccaaatttggtgattaccggaaggatgatcctgcatcatttactctgaatcaa
aacttttcactgttccctcagtttacatttaatctccgacgttcacagtttgtccaggtg
ttcaacaacagtccagacgaaactgcgtacaaccgcatgcttttgaaccgagaaaatatt
tcaaacgcagctgttatgattcaaccatctctaacaacttactcgtttagcacgctgcct
cagcctgcgttgttggatgttgcttccatcgctgcagaccgtatcctcttgttggattct
tacatcagtgttgtcattttccatgggatgaccatagcgcagtggcgcaacttgggctat
caaaatcagcctgaacatcaggcatttgcacaactcttggaagccccacaagaagatgcg
cagatgatcgtccgtgaacgtttccctgtaccgagattagttgtatgtgatcaacatgga
tctcaggcaaggtttttgttagcgaagctaaatccgtcagcaacatacaacaacccgagt
gagatgaatgcaggttctgatgtaatcttcacggatgatgtgagtctccaagtcttcttc
caacatcttcagaaattggctgttcaatcttga
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