Raphanus sativus (radish): 108819383
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Entry
108819383 CDS
T06014
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108819383
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108819383
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
NRIP1_repr_2
zf-C2H2_4
zf-C2H2_6
zf-met
IF2_N
Motif
Other DBs
NCBI-GeneID:
108819383
NCBI-ProteinID:
XP_018447905
UniProt:
A0A6J0KJ34
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Position
1:complement(1884809..1887285)
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AA seq
500 aa
AA seq
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MTAEDQTISSSGGYVQSLSTTDHVDHHHERESFNPPAKKKRNLPGNPDPEAEVIALSPKT
LMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKSCVHHHP
TRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFSR
RDSFITHRAFCDALAEETARLNAASHLKSLTSNNLNYHYLMGTLIPSPQPPPPPFPFGPP
QPPQHHHHHFPITTNTFDHHHNDVMKPASSLSLWMGGNINHHGVTIDDGIAPQQQSPQDD
FSWSFGNANNRGELITTSDSLITHENINIFPSKENANAATSLSVPSLFSSVDHITQDANA
AASAVANMSATALLQKAAQMGVTSSTPSTTITTNQSTFHQSFALKTSDQSQIVEDGGSDK
FFALFGPNSVGLMSNNGLQHENENPRSGVTVVSEFGELHNYPLKRRRVESGDAGGGGQTR
DFLGVGVQTMCHSSSINGWI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaggatcagacaatttcaagtagtggaggatatgtacaaagcttatcaaca
actgatcatgttgatcatcatcatgaacgtgaatcctttaatcctcctgctaagaagaag
agaaacctccctggaaaccctgatccagaagccgaggtcatagctttatctccaaagacg
cttatggccacaaaccgctttctctgcgagatatgtggaaaaggtttccaaagagaccag
aatctacagcttcaccgtcgaggacacaacctcccatggaaactgaagcagcggacgacc
aaagaagtaaggaaacgagtgtatgtatgtccggagaagagttgcgttcatcaccatccg
acaagggcactcggcgaccttacaggaatcaagaaacatttttgtcggaaacatggcgag
aagaagtggaagtgcgagaaatgttccaagagatatgcagttcaatccgattggaaagct
cattcaaagacttgtgggactagagagtatagatgtgactgtggtacaattttctccagg
agagacagcttcattacacacagagcgttttgcgacgccttggcagaagaaaccgcaagg
ctaaacgcagcttctcatctcaaaagccttaccagtaataacctaaactaccattatctc
atgggcacacttatcccatcaccacaaccaccaccaccaccgtttccgttcggaccaccg
caaccaccgcaacatcaccaccaccatttccctataacgaccaacaccttcgatcatcat
cataatgacgtcatgaaacctgcttcttcgctctccctatggatgggaggaaatatcaat
catcatggagtgaccatcgacgacggtatcgcgccgcagcagcagtcaccgcaagatgat
ttcagttggagtttcgggaacgcaaataatcgcggcgagttaataaccactagcgattca
cttatcacacatgaaaatattaacatcttcccgagtaaggaaaacgcaaacgcggctact
tcactttccgtgccttctctttttagcagcgtcgaccacatcacacaagacgcaaacgca
gctgcatcggcggttgcgaacatgtcagcaactgcattacttcaaaaagcggctcagatg
ggggtgacttcttctactccgtcgacgacgatcaccaccaaccaatccacgtttcatcag
agttttgcgttgaaaacctccgatcagagtcagattgtagaagatggtggcagcgacaag
ttctttgccttgtttggaccgaacagcgtcgggttaatgagtaacaatggtcttcaacac
gagaacgagaaccctagaagtggcgttacggtcgtctcggagtttggtgaattacacaac
taccccttgaaacgtagaagagttgagagtggggatgcaggaggaggagggcaaactcga
gatttccttggggttggtgtacaaacaatgtgtcattcatcgtctatcaatggatggatt
tga
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