Raphanus sativus (radish): 108819433
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Entry
108819433 CDS
T06014
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108819433
09124 Replication and repair
03420 Nucleotide excision repair
108819433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108819433
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108819433
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108819433
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108819433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
108819433
NCBI-ProteinID:
XP_018447977
UniProt:
A0A6J0KJ33
LinkDB
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Position
8:complement(3265964..3268493)
Genome browser
AA seq
303 aa
AA seq
DB search
MASVASKLYSDDVSLLVLLLDTNPFFWDTTSTTFSQFLSHVLAFLNAVLGLNQLNQVVVI
ATGYSSCDYIYDSSLTSNVGSESRGSGMPALFGSLLEKLEDFIGRDEELAKEDEHVDKIA
PSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI
DSCYIGTQNSAFLQQASYITGGVHHAPKQLDGLFQFLTTIFATDLHTRRFVQLPKPVGVD
FRASCFCHKKTIDMGYVCSVCLSIFCEHHKKCSTCGSVFGQSKLDGANASSSVNDRKRKA
PDS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgttgcttcaaagctgtattcagatgatgtaagtctcctagtgttgttgctt
gatacgaatcccttcttctgggacaccacatccactaccttctctcagttcctctctcat
gtgcttgcttttctgaacgcggttttggggttgaatcagttgaaccaagttgtggtgata
gctactggttacagttcatgcgattacatttacgattcgtctttgacatcgaatgtggga
tctgagagcaggggaagtggaatgcctgctctttttgggtccttgctggagaaattggag
gactttattgggagagatgaggagctcgccaaggaggatgagcatgtggataagatagct
ccttctctcttgtcaggatcactctccatggctctctgctatatacagagggttttccgt
tctggacatcttcatccccagcctcggattctatgcttgcaaggttccccagatggcccg
gaacaatatgtagctgtgatgaactctattttctctgctcaacgcctaatggttcccatt
gattcctgttacataggtacacagaactcagcatttttgcagcaggcatcttacataacc
ggcggagtacatcatgcacctaaacaattggatgggctgtttcagtttctaacgacgatc
tttgcaactgatttgcatacccgccgttttgtacaacttcctaaacctgtaggcgttgat
tttcgagcatcgtgtttttgccacaagaagactatagatatggggtacgtatgttcagtg
tgtctgtcgattttctgtgagcatcacaagaaatgttcaacgtgcgggtctgtttttggt
cagtctaaacttgatggtgctaatgcttcatcatctgtcaatgataggaagagaaaagct
cctgattcctaa
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integrated database retrieval system
